DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4A and Eif4a2

DIOPT Version :10

Sequence 1:NP_476595.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_006248596.1 Gene:Eif4a2 / 303831 RGDID:1309225 Length:408 Species:Rattus norvegicus


Alignment Length:402 Identity:293/402 - (72%)
Similarity:354/402 - (88%) Gaps:1/402 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRNEIPQDGPASMEPEGVIESTWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRG 67
            |.|.....||..|:|:|||||.|:|:.||||||||:|.||||||.|||||||||||||||||::|
  Rat     7 DYNSREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG 71

  Fly    68 RDVIAQAQSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHAC 132
            .||||||||||||||||:|:||||::...:|.|||:||||||||.|||:|::|||:||....|||
  Rat    72 YDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHAC 136

  Fly   133 IGGTNVREDARILESGC-HVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDV 196
            |||||||.:.:.|::.. |:||||||||:||:||:.|..::||:||||||||||||||||||.::
  Rat   137 IGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEI 201

  Fly   197 FKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLC 261
            |:.|...:||:|||||||.|||||::.|||||:.|||||||||||||||||:||::|.|||.|||
  Rat   202 FQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLC 266

  Fly   262 DLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITT 326
            |||:||:|||:|||.|||||||.||::|...:|||||:||||:|::|:|||::||||||||||||
  Rat   267 DLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITT 331

  Fly   327 DLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTT 391
            |||||||||||||||||||||:||||||||||||||||||||||||:|::|:|||:|||.||:||
  Rat   332 DLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTT 396

  Fly   392 IEEMPANIADLI 403
            :||||.|:||||
  Rat   397 VEEMPMNVADLI 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_476595.1 DEAD-like_helicase_N 6..403 CDD:475120 289/397 (73%)
Eif4a2XP_006248596.1 DEAD-like_helicase_N 9..408 CDD:475120 290/398 (73%)

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