Protein Alignment eIF4A and vas

DIOPT Version :9

• Sequence 1: NP_001245907.1
• Gene: eIF4A / 33835
• FlyBaseID: FBgn0001942
• Length: 403
• Species: Drosophila melanogaster
• Sequence 2: NP_001260458.1
• Gene: vas / 26067080
• FlyBaseID: FBgn0283442
• Length: 661
• Species: Drosophila melanogaster
• Alignment Length: 404
• Identity: 127/404 - (31%)
• Similarity: 213/404 - (52%)
• Gaps: 27/404 - (6%)

  Fly     5 NEIPQDGPASMEPEGVIESTWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRD 69
            |.||.....|..|:.:         .:|...:||:.::..:...|::.|:.||:.:|.....|||
  Fly   229 NNIPVKVTGSDVPQPI---------QHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRD 284

  Fly    70 VIAQAQSGTGKTATFSIAILQQI-----DTSIRECQALILAPTRELATQI--QRVVMALGEYMKV 127
            ::|.||:|:||||.|.:.||.::     :..:...|.:|::||||||.||  :....|...|:|:
  Fly   285 LMACAQTGSGKTAAFLLPILSKLLEDPHELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKI 349

  Fly   128 HSHACIGGTNVREDARILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQ 192
              ....|||:.|.....:..|||||:.||||:.|.::|..:..:..:..||||||.||..||.:.
  Fly   350 --GIVYGGTSFRHQNECITRGCHVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSED 412

  Fly   193 IQDVFK--MLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENW 255
            ::.:..  .:.|:.|.::.|||.|.::..::..|:::.|.:.:.........:||....|.
  Fly   413 MRRIMTHVTMRPEHQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVN---- 473

  Fly   256 KLGTLCDLYDTLS--ITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSG 318
            |......|.:.||  ...:::|..|:|..|.|...:|...|..:::|||..|..||..::.|::|
  Fly   474 KYAKRSKLIEILSEQADGTIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNG 538

  Fly   319 SSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFI-TDDDRRILK 382
            |.:|||.|.:.:||:|::.:..|||||:||..::|:|||||.||.|..|.|.:|. .:.||.|..
  Fly   539 SMKVLIATSVASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAA 603

  Fly   383 DIEQFYHTTIEEMP 396
            |:.:....:.:.:|
  Fly   604 DLVKILEGSGQTVP 617

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
eIF4A	NP_001245907.1	PTZ00424	6..403	CDD:185609	126/403 (31%)
		DEADc	32..232	CDD:238167	68/208 (33%)
		Helicase_C	254..358	CDD:278689	37/105 (35%)
vas	NP_001260458.1	DEADc	247..454	CDD:238167	68/208 (33%)
		DEXDc	260..467	CDD:214692	65/208 (31%)
		Helicase_C	475..584	CDD:278689	41/108 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45451610
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840