DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4A and SPAC1F5.10

DIOPT Version :9

Sequence 1:NP_001245907.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_592863.1 Gene:SPAC1F5.10 / 2541602 PomBaseID:SPAC1F5.10 Length:394 Species:Schizosaccharomyces pombe


Alignment Length:386 Identity:252/386 - (65%)
Similarity:320/386 - (82%) Gaps:3/386 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IESTWHE---VYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTA 82
            :|.|..|   ...:|::|||:|:||||||.||:|.|||:|.||||...:||||||||||||||||
pombe     9 VELTTSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSGTGKTA 73

  Fly    83 TFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILES 147
            ||||.|||.||.|:|:.|||||:||||||.|||.||:|||::|.|..|||||||:|..|.:.|:.
pombe    74 TFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVGNDIKKLDY 138

  Fly   148 GCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPDVQVILLSAT 212
            |.|||.||||||.|||.|:.|||:.:|:.:||||||:|::|||:||.|:::.|||..||:::|||
pombe   139 GQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLPPGTQVVVVSAT 203

  Fly   213 MPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDTLSITQSVIFCN 277
            :|.||||::..|..:||.||||::||||||:||:::.|::|.||..|||||||||:|||:|||||
pombe   204 LPQDVLEMTNKFTTNPVRILVKRDELTLEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCN 268

  Fly   278 TRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVI 342
            :|||||.||::|...||||::|||:|.|::|:.||:.||.|:|||||.||:.|||||||||||||
pombe   269 SRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVI 333

  Fly   343 NYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANIADLI 403
            |||||:|||||||||||.||||||||||||:|::|.|||:||||:|.|.|:|||.||.|::
pombe   334 NYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDVRILRDIEQYYSTVIDEMPMNIGDMV 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_001245907.1 PTZ00424 6..403 CDD:185609 252/384 (66%)
DEADc 32..232 CDD:238167 127/199 (64%)
Helicase_C 254..358 CDD:278689 75/103 (73%)
SPAC1F5.10NP_592863.1 PTZ00424 19..392 CDD:185609 248/372 (67%)
DEADc 23..223 CDD:238167 127/199 (64%)
HELICc 234..363 CDD:238034 92/128 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53631
OrthoFinder 1 1.000 - - FOG0000304
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X250
TreeFam 00.000 Not matched by this tool.
43.920

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