DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4A and F57B9.3

DIOPT Version :9

Sequence 1:NP_001245907.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_498514.2 Gene:F57B9.3 / 186440 WormBaseID:WBGene00018997 Length:394 Species:Caenorhabditis elegans


Alignment Length:382 Identity:196/382 - (51%)
Similarity:268/382 - (70%) Gaps:9/382 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ESTWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSI 86
            |..:.||.::||||.|:|||||||||:|||||||||:.|:.||..|:||..|:|:|:|||....|
 Worm    19 EGNYDEVVESFDDMELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLI 83

  Fly    87 AILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGCHV 151
            .|||.||......|.::|||.|.:|.:....:.:||..:.|:: .|:|.....|:.:|    .||
 Worm    84 DILQGIDCEDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCLGFDTTAENDKI----SHV 143

  Fly   152 VVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPDVQVILLSATMPPD 216
            ::|||   .|.::.....|..||:|||||||||||:||||||.:||:.:|.||||:|||||||.:
 Worm   144 LMGTP---KDFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSATMPSE 205

  Fly   217 VLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDTLSITQSVIFCNTRRK 281
            ||:|:..|||||:.|||||:|||||||:|||:||:::.||...||||..|...||::|||||||:
 Worm   206 VLDVTNRFMRDPIRILVKKDELTLEGIRQFYINVQKDEWKFNCLCDLLKTSRETQALIFCNTRRR 270

  Fly   282 VDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDL 346
            |.|||:::......||..||:||..:||.::|.|.|.::|||:||||:|||::::: ||:||||:
 Worm   271 VTQLTEQLMSIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARGMNIRK-SLIINYDV 334

  Fly   347 PSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANIADLI 403
            ..|.|||:.|.||.|.||.||:.|:|.|::|...||.||..|.|.|||||.:..:.:
 Worm   335 SGNMENYMLRNGRQGNFGSKGLPISFFTENDISDLKKIENHYSTRIEEMPESFLEYL 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_001245907.1 PTZ00424 6..403 CDD:185609 196/380 (52%)
DEADc 32..232 CDD:238167 102/199 (51%)
Helicase_C 254..358 CDD:278689 52/103 (50%)
F57B9.3NP_498514.2 PTZ00424 19..391 CDD:185609 196/380 (52%)
P-loop_NTPase 29..221 CDD:304359 102/199 (51%)
Helicase_C 243..352 CDD:278689 55/109 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I7066
eggNOG 1 0.900 - - E2759_KOG0327
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53631
OrthoDB 1 1.010 - - D321438at33208
OrthoFinder 1 1.000 - - FOG0000304
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24031
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.930

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