DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF4A and Eif4a2

DIOPT Version :9

Sequence 1:NP_001245907.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001334108.1 Gene:Eif4a2 / 13682 MGIID:106906 Length:408 Species:Mus musculus


Alignment Length:402 Identity:293/402 - (72%)
Similarity:354/402 - (88%) Gaps:1/402 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DRNEIPQDGPASMEPEGVIESTWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRG 67
            |.|.....||..|:|:|||||.|:|:.||||||||:|.||||||.|||||||||||||||||::|
Mouse     7 DYNSREHGGPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKG 71

  Fly    68 RDVIAQAQSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHAC 132
            .||||||||||||||||:|:||||::...:|.|||:||||||||.|||:|::|||:||....|||
Mouse    72 YDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHAC 136

  Fly   133 IGGTNVREDARILESGC-HVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDV 196
            |||||||.:.:.|::.. |:||||||||:||:||:.|..::||:||||||||||||||||||.::
Mouse   137 IGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEI 201

  Fly   197 FKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLC 261
            |:.|...:||:|||||||.|||||::.|||||:.|||||||||||||||||:||::|.|||.|||
Mouse   202 FQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLC 266

  Fly   262 DLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITT 326
            |||:||:|||:|||.|||||||.||::|...:|||||:||||:|::|:|||::||||||||||||
Mouse   267 DLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITT 331

  Fly   327 DLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTT 391
            |||||||||||||||||||||:||||||||||||||||||||||||:|::|:|||:|||.||:||
Mouse   332 DLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTT 396

  Fly   392 IEEMPANIADLI 403
            :||||.|:||||
Mouse   397 VEEMPMNVADLI 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_001245907.1 PTZ00424 6..403 CDD:185609 289/397 (73%)
DEADc 32..232 CDD:238167 139/200 (70%)
Helicase_C 254..358 CDD:278689 82/103 (80%)
Eif4a2NP_001334108.1 PTZ00424 9..408 CDD:185609 290/398 (73%)
Q motif 34..62 24/27 (89%)
DEAD box 184..187 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 230 1.000 Domainoid score I2445
eggNOG 1 0.900 - - E2759_KOG0327
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1487
Inparanoid 1 1.050 603 1.000 Inparanoid score I932
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53631
OrthoDB 1 1.010 - - D321438at33208
OrthoFinder 1 1.000 - - FOG0000304
OrthoInspector 1 1.000 - - otm43454
orthoMCL 1 0.900 - - OOG6_101294
Panther 1 1.100 - - O PTHR24031
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R594
SonicParanoid 1 1.000 - - X250
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.910

Return to query results.
Submit another query.