DRSC/TRiP Functional Genomics Resources

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Protein Alignment chic and PRF5

DIOPT Version :9

Sequence 1:NP_001245905.1 Gene:chic / 33834 FlyBaseID:FBgn0000308 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_179567.1 Gene:PRF5 / 816496 AraportID:AT2G19770 Length:134 Species:Arabidopsis thaliana


Alignment Length:133 Identity:55/133 - (41%)
Similarity:79/133 - (59%) Gaps:8/133 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSWQDYVDNQLLA------SQCVTKACIAGHDGNIWAQSSGFEVTK-EELSKLISGFDQQDGLTS 58
            ||||.|||..|:.      ...:|.|.|.||||::||||:.|...| :|::.::..||:...|..
plant     1 MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEPGHLAP 65

  Fly    59 NGVTLAGQRYIYLSG-TDRVVRAKLGRSGVHCMKTTQAVIVSIYEDPVQPQQAASVVEKLGDYLI 122
            .|:.|||.:|:.:.| .:.|:|.|.|..|:...||.|:::..:||:||.|.|...|||:||||||
plant    66 TGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNMVVERLGDYLI 130

  Fly   123 TCG 125
            ..|
plant   131 EQG 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chicNP_001245905.1 PROF 1..126 CDD:214646 55/133 (41%)
PRF5NP_179567.1 Profilin 1..131 CDD:395179 53/129 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 103 1.000 Domainoid score I2250
eggNOG 1 0.900 - - E1_KOG1755
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40274
Inparanoid 1 1.050 103 1.000 Inparanoid score I2147
OMA 1 1.010 - - QHG53820
OrthoDB 1 1.010 - - D1428600at2759
OrthoFinder 1 1.000 - - FOG0002709
OrthoInspector 1 1.000 - - otm2534
orthoMCL 1 0.900 - - OOG6_101239
Panther 1 1.100 - - O PTHR11604
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4911
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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