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Protein Alignment chic and Pfn2
DIOPT Version :9
Sequence 1: | NP_001245905.1 |
Gene: | chic / 33834 |
FlyBaseID: | FBgn0000308 |
Length: | 126 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_110500.2 |
Gene: | Pfn2 / 81531 |
RGDID: | 621826 |
Length: | 140 |
Species: | Rattus norvegicus |
Alignment Length: | 120 |
Identity: | 34/120 - (28%) |
Similarity: | 55/120 - (45%) |
Gaps: | 37/120 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 WQDYVDNQLLASQCVTKACIAGH-DGN-IWAQSSG--FE-VTKEELSKLISGFDQQDGLTSNGVT 62
||.|||| |:...|..:|.|.|: |.. :||.::| |: :|..|:..:| |.| ::|..:||:|
Rat 4 WQSYVDN-LMCDGCCQEAAIVGYCDAKYVWAATAGGVFQSITPAEIDVII-GKD-REGFFTNGLT 65
Fly 63 LAGQR------YIYLSG-----------------------TDRVVRAKLGRSGVH 88
|.|:: .:|:.. ..||:...:|:.|||
Rat 66 LGGKKCSVIRDSLYVDSDCTMDIRTKSQGGEPTYNVAVGRAGRVLVFVMGKEGVH 120
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
chic | NP_001245905.1 |
PROF |
1..126 |
CDD:214646 |
34/120 (28%) |
Pfn2 | NP_110500.2 |
PROF |
2..140 |
CDD:214646 |
34/120 (28%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1755 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1428600at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.820 |
|
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