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Protein Alignment chic and Pfn3
DIOPT Version :9
Sequence 1: | NP_001245905.1 |
Gene: | chic / 33834 |
FlyBaseID: | FBgn0000308 |
Length: | 126 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001102957.1 |
Gene: | Pfn3 / 685936 |
RGDID: | 1587838 |
Length: | 137 |
Species: | Rattus norvegicus |
Alignment Length: | 134 |
Identity: | 32/134 - (23%) |
Similarity: | 55/134 - (41%) |
Gaps: | 37/134 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 WQDYVDNQLLASQCVTKACIAGHDGN--IWAQSSG---FEVTKEELSKLISGFDQQDGLTSNGVT 62
|:.|: :.:|..|.:....|.||..| :||...| ..::.:|:. :::|.|:...| ..|::
Rat 4 WKGYI-SAVLRDQRIDDVAIVGHSDNRCVWASRPGGLLAAISPQEVG-VLTGPDRHTFL-QTGLS 65
Fly 63 LAGQR------YIYLSG--------------------TDRVVRAKLGRSGVH---CMKTTQAVIV 98
:||:| |:...| |.|.:...:||.||| ..||...:|.
Rat 66 VAGRRCCVIRDYLLAEGDGVLDARTKGLDGRAICVGHTPRALLVLMGRRGVHGGILNKTVHDLIG 130
Fly 99 SIYE 102
.:.|
Rat 131 GLRE 134
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
chic | NP_001245905.1 |
PROF |
1..126 |
CDD:214646 |
32/134 (24%) |
Pfn3 | NP_001102957.1 |
PROF |
3..137 |
CDD:238085 |
32/134 (24%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1428600at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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