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Protein Alignment chic and pfn2b
DIOPT Version :9
Sequence 1: | NP_001245905.1 |
Gene: | chic / 33834 |
FlyBaseID: | FBgn0000308 |
Length: | 126 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_958493.1 |
Gene: | pfn2b / 394235 |
ZFINID: | ZDB-GENE-040115-4 |
Length: | 140 |
Species: | Danio rerio |
Alignment Length: | 150 |
Identity: | 38/150 - (25%) |
Similarity: | 57/150 - (38%) |
Gaps: | 34/150 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSWQDYVDNQLLASQCVTKACIAGHDGN---IW-AQSSG--FEVTKEELSKLISGFDQQDGLTSN 59
|||..||:|.:....| ..|.|.|.... :| ||..| ..:|..|:..|: |.|:|...| |
Zfish 1 MSWASYVENLMSDGSC-QDAAIVGCTAEAKYVWGAQEGGTFANITPTEIDVLV-GKDRQSFFT-N 62
Fly 60 GVTLAGQRYIYLSGTDRVVRAKLGRSGVHCM------------------KTTQAVIVSIYEDPVQ 106
|:||..::. .|:|..|...|...| |.|:.:|:...::.:.
Zfish 63 GLTLGSKKC-------SVIRDNLTTEGDWTMDIRTKSQGGEPTYNIAVGKATKTLIMVKGKEGIH 120
Fly 107 PQQAASVVEKLGDYLITCGY 126
..|.......:.:||...||
Zfish 121 GGQLNKKTYTMAEYLRRSGY 140
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
chic | NP_001245905.1 |
PROF |
1..126 |
CDD:214646 |
36/148 (24%) |
pfn2b | NP_958493.1 |
PROF |
1..140 |
CDD:214646 |
36/148 (24%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG1755 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1428600at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101239 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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