DRSC/TRiP Functional Genomics Resources

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Protein Alignment chic and pfn1

DIOPT Version :10

Sequence 1:NP_477016.1 Gene:chic / 33834 FlyBaseID:FBgn0000308 Length:126 Species:Drosophila melanogaster
Sequence 2:NP_001123808.1 Gene:pfn1 / 100170559 XenbaseID:XB-GENE-5747742 Length:138 Species:Xenopus tropicalis


Alignment Length:141 Identity:42/141 - (29%)
Similarity:63/141 - (44%) Gaps:18/141 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSWQDYVDNQLLASQCVTKACIAGH--DGNIWAQSSG---FEVTKEELSKLISGFDQQDGLTSNG 60
            |||..|||| |:....|..|.|.||  ..::||.:.|   .::|..|::.::||  .::.|..||
 Frog     1 MSWSGYVDN-LMGGGQVQDAAIVGHTDSPSVWAATPGGIFSKITAAEINAVVSG--DREKLFVNG 62

  Fly    61 VTLAGQRYIYL----SGTDRVV---RAKLGRS---GVHCMKTTQAVIVSIYEDPVQPQQAASVVE 115
            :.|.||:...|    |..|..|   |.|....   .:...||.:|:::.:....|........|.
 Frog    63 LVLGGQKCSVLRDEFSVADNQVMDLRTKNPNGPTYNISICKTAKALVLVMGNAEVHGGCLNKKVF 127

  Fly   116 KLGDYLITCGY 126
            .:|.||...||
 Frog   128 DMGKYLRCAGY 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chicNP_477016.1 Profilin 1..122 CDD:459724 39/135 (29%)
pfn1NP_001123808.1 PROF 1..138 CDD:214646 40/139 (29%)

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