DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ucp4B and Ucp2

DIOPT Version :9

Sequence 1:NP_608977.1 Gene:Ucp4B / 33833 FlyBaseID:FBgn0031758 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_062227.2 Gene:Ucp2 / 54315 RGDID:3932 Length:309 Species:Rattus norvegicus


Alignment Length:301 Identity:100/301 - (33%)
Similarity:164/301 - (54%) Gaps:19/301 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 PPVEL--YLTAFASACSAEIVGYPFDMCKTRMQIQGEI--ASRVGQKAKYRGLLATAMGIVREEG 95
            ||...  :|.|..:||.|:::.:|.|..|.|:|||||.  .:|....|:|||:|.|.:.:||.||
  Rat    10 PPTATVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLARTAASAQYRGVLGTILTMVRTEG 74

  Fly    96 LLKLYGGISAMLFRHSLFSGIKMLTYDYMREKMIVPDEDGRPQLSFLGS-CISGVLAGATASVLT 159
            ...||.|:.|.|.|...|:.:::..||.:::......|.     :.:|| .::|...||.|..:.
  Rat    75 PRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEH-----AGIGSRLLAGSTTGALAVAVA 134

  Fly   160 NPTELIKIQMQMEGQRRLRGEPPRIHNVLQALTSIYRTGGVVGLWKGTVPNTWRSALVTIGDVSC 224
            .||:::|::.|.:.:   .|...|..:.::|..:|.|..|:.||||||.||..|:|:|...::..
  Rat   135 QPTDVVKVRFQAQAR---AGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCTELVT 196

  Fly   225 YDFCKRFLIAEFDLVDNREVQFVAAMTAGVADAILSLPADVVKSRIMNQPTDEQGRGIHYKGSLD 289
            ||..|..|:....:.|:....|.:|..||....:::.|.||||:|.||....:      |..:..
  Rat   197 YDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQ------YHSAGH 255

  Fly   290 CLSRLVREEGFLAMYKGFIPYWMRVGPASVVFWMTFEQIRR 330
            |...::|:||..|.||||:|.::|:|..:||.::|:||::|
  Rat   256 CALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKR 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4BNP_608977.1 PTZ00169 32..306 CDD:240302 88/275 (32%)
Mito_carr 32..129 CDD:278578 36/97 (37%)
Mito_carr 138..233 CDD:278578 30/95 (32%)
Mito_carr 246..331 CDD:278578 31/85 (36%)
Ucp2NP_062227.2 Mito_carr 10..111 CDD:395101 36/100 (36%)
Solcar 1 11..106 35/94 (37%)
Mito_carr 112..206 CDD:395101 32/101 (32%)
Solcar 2 114..203 30/91 (33%)
Solcar 3 212..297 32/91 (35%)
Mito_carr 217..299 CDD:395101 31/86 (36%)
Purine nucleotide binding. /evidence=ECO:0000250 276..298 8/21 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0759
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54059
OrthoDB 1 1.010 - - D382447at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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