DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ucp4B and Ucp3

DIOPT Version :9

Sequence 1:NP_608977.1 Gene:Ucp4B / 33833 FlyBaseID:FBgn0031758 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_037299.1 Gene:Ucp3 / 25708 RGDID:3933 Length:308 Species:Rattus norvegicus


Alignment Length:307 Identity:110/307 - (35%)
Similarity:165/307 - (53%) Gaps:28/307 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KTPP--VELYLTAFASACSAEIVGYPFDMCKTRMQIQGEIASRVG-QKAKYRGLLATAMGIVREE 94
            :.||  |..:|.|..:||.|:::.:|.|..|.|:|||||   ..| |..:|||:|.|.:.:||.|
  Rat     8 EVPPTTVVKFLGAGTAACFADLLTFPLDTAKVRLQIQGE---NPGVQSVQYRGVLGTILTMVRTE 69

  Fly    95 GLLKLYGGISAMLFRHSLFSGIKMLTYDYMREKMIVPDEDGRPQLSFLGSCISGVLAGATASVLT 159
            |....|.|:.|.|.|...|:.|::..||.::: ...|  .|....|.....::|...||.|....
  Rat    70 GPRSPYSGLVAGLHRQMSFASIRIGLYDSVKQ-FYTP--KGTDHSSVAIRILAGCTTGAMAVTCA 131

  Fly   160 NPTELIKIQMQ------MEGQRRLRGEPPRIHNVLQALTSIYRTGGVVGLWKGTVPNTWRSALVT 218
            .||:::|::.|      ..|:|:.||       .:.|..:|.|..||.||||||.||..|:|:|.
  Rat   132 QPTDVVKVRFQAMIRLGTGGERKYRG-------TMDAYRTIAREEGVRGLWKGTWPNITRNAIVN 189

  Fly   219 IGDVSCYDFCKRFLIAEFDLVDNREVQFVAAMTAGVADAILSLPADVVKSRIMNQPTDEQGRGIH 283
            ..::..||..|..|:......||....||:|..||....:::.|.||||:|.||.|   .||   
  Rat   190 CAEMVTYDIIKEKLLDSHLFTDNFPCHFVSAFGAGFCATVVASPVDVVKTRYMNAP---PGR--- 248

  Fly   284 YKGSLDCLSRLVREEGFLAMYKGFIPYWMRVGPASVVFWMTFEQIRR 330
            |:..|.|:.|:|.:||..|.||||:|.::|:|..:|:.::|:||::|
  Rat   249 YRSPLHCMLRMVAQEGPTAFYKGFMPSFLRLGSWNVMMFVTYEQLKR 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4BNP_608977.1 PTZ00169 32..306 CDD:240302 99/281 (35%)
Mito_carr 32..129 CDD:278578 37/98 (38%)
Mito_carr 138..233 CDD:278578 32/100 (32%)
Mito_carr 246..331 CDD:278578 36/85 (42%)
Ucp3NP_037299.1 Mito_carr 10..107 CDD:278578 38/102 (37%)
Solcar 1 11..102 36/94 (38%)
PTZ00169 13..298 CDD:240302 108/302 (36%)
Mito_carr 109..206 CDD:278578 33/103 (32%)
Solcar 2 111..202 32/97 (33%)
Mito_carr 209..299 CDD:278578 38/93 (41%)
Solcar 3 211..296 38/91 (42%)
Purine nucleotide binding. /evidence=ECO:0000250 275..297 7/21 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0759
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54059
OrthoDB 1 1.010 - - D382447at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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