DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ucp4B and Ucp1

DIOPT Version :9

Sequence 1:NP_608977.1 Gene:Ucp4B / 33833 FlyBaseID:FBgn0031758 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_036814.1 Gene:Ucp1 / 24860 RGDID:3931 Length:307 Species:Rattus norvegicus


Alignment Length:298 Identity:98/298 - (32%)
Similarity:157/298 - (52%) Gaps:16/298 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 TPPVELYLTAFASACSAEIVGYPFDMCKTRMQIQGEIASRVGQKAKYRGLLATAMGIVREEGLLK 98
            |..|::: :|..|||.|:|:.:|.|..|.|:|||||  .:.....:|:|:|.|...:.:.|||.|
  Rat    12 TMGVKIF-SAGVSACLADIITFPLDTAKVRLQIQGE--GQASSTIRYKGVLGTITTLAKTEGLPK 73

  Fly    99 LYGGISAMLFRHSLFSGIKMLTYDYMREKMIVPDEDGRPQLSFLGSCIS-GVLAGATASVLTNPT 162
            ||.|:.|.:.|...|:.:::..||.::|..    ..||...:.|||.|| |::.|..|..:..||
  Rat    74 LYSGLPAGIQRQISFASLRIGLYDTVQEYF----SSGRETPASLGSKISAGLMTGGVAVFIGQPT 134

  Fly   163 ELIKIQMQMEGQRRLRGEPPRIHNVLQALTSIYRTGGVVGLWKGTVPNTWRSALVTIGDVSCYDF 227
            |::|::||  .|..|.|..||......|...|..|..:..|||||.||..|:.::...::..||.
  Rat   135 EVVKVRMQ--AQSHLHGIKPRYTGTYNAYRVIATTESLSTLWKGTTPNLMRNVIINCTELVTYDL 197

  Fly   228 CKRFLIAEFDLVDNREVQFVAAMTAGVADAILSLPADVVKSRIMNQPTDEQGRGIHYKGSLDCLS 292
            .|..|:....|.|:.....::|:.||....:|:.|.||||:|.:|....:      |.....|..
  Rat   198 MKGALVNHHILADDVPCHLLSALVAGFCTTLLASPVDVVKTRFINSLPGQ------YPSVPSCAM 256

  Fly   293 RLVREEGFLAMYKGFIPYWMRVGPASVVFWMTFEQIRR 330
            .:..:||..|.:|||.|.::|:|..:|:.::.|||:::
  Rat   257 TMYTKEGPAAFFKGFAPSFLRLGSWNVIMFVCFEQLKK 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4BNP_608977.1 PTZ00169 32..306 CDD:240302 88/272 (32%)
Mito_carr 32..129 CDD:278578 34/94 (36%)
Mito_carr 138..233 CDD:278578 33/95 (35%)
Mito_carr 246..331 CDD:278578 26/85 (31%)
Ucp1NP_036814.1 Mito_carr 10..103 CDD:278578 34/93 (37%)
Solcar 1 11..102 33/92 (36%)
PTZ00169 21..297 CDD:240302 95/288 (33%)
Mito_carr 110..205 CDD:278578 34/96 (35%)
Solcar 2 111..201 33/91 (36%)
Solcar 3 210..295 27/91 (30%)
Mito_carr 215..300 CDD:278578 26/86 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0759
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54059
OrthoDB 1 1.010 - - D382447at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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