DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ucp4B and Ucp1

DIOPT Version :9

Sequence 1:NP_608977.1 Gene:Ucp4B / 33833 FlyBaseID:FBgn0031758 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_033489.1 Gene:Ucp1 / 22227 MGIID:98894 Length:307 Species:Mus musculus


Alignment Length:298 Identity:96/298 - (32%)
Similarity:157/298 - (52%) Gaps:16/298 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 TPPVELYLTAFASACSAEIVGYPFDMCKTRMQIQGEIASRVGQKAKYRGLLATAMGIVREEGLLK 98
            |..|::: :|..|||.|:|:.:|.|..|.|:|||||  .:.....:|:|:|.|...:.:.|||.|
Mouse    12 TMGVKIF-SAGVSACLADIITFPLDTAKVRLQIQGE--GQASSTIRYKGVLGTITTLAKTEGLPK 73

  Fly    99 LYGGISAMLFRHSLFSGIKMLTYDYMREKMIVPDEDGRPQLSFLGSCIS-GVLAGATASVLTNPT 162
            ||.|:.|.:.|...|:.:::..||.::|..    ..||...:.||:.|| |::.|..|..:..||
Mouse    74 LYSGLPAGIQRQISFASLRIGLYDSVQEYF----SSGRETPASLGNKISAGLMTGGVAVFIGQPT 134

  Fly   163 ELIKIQMQMEGQRRLRGEPPRIHNVLQALTSIYRTGGVVGLWKGTVPNTWRSALVTIGDVSCYDF 227
            |::|::||  .|..|.|..||......|...|..|..:..|||||.||..|:.::...::..||.
Mouse   135 EVVKVRMQ--AQSHLHGIKPRYTGTYNAYRVIATTESLSTLWKGTTPNLMRNVIINCTELVTYDL 197

  Fly   228 CKRFLIAEFDLVDNREVQFVAAMTAGVADAILSLPADVVKSRIMNQPTDEQGRGIHYKGSLDCLS 292
            .|..|:....|.|:.....::|:.||....:|:.|.||||:|.:|....:      |.....|..
Mouse   198 MKGALVNNKILADDVPCHLLSALVAGFCTTLLASPVDVVKTRFINSLPGQ------YPSVPSCAM 256

  Fly   293 RLVREEGFLAMYKGFIPYWMRVGPASVVFWMTFEQIRR 330
            .:..:||..|.:|||:..::|:|..:|:.::.|||:::
Mouse   257 SMYTKEGPTAFFKGFVASFLRLGSWNVIMFVCFEQLKK 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4BNP_608977.1 PTZ00169 32..306 CDD:240302 87/272 (32%)
Mito_carr 32..129 CDD:278578 34/94 (36%)
Mito_carr 138..233 CDD:278578 32/95 (34%)
Mito_carr 246..331 CDD:278578 25/85 (29%)
Ucp1NP_033489.1 Mito_carr 10..103 CDD:278578 34/93 (37%)
Solcar 1 11..102 33/92 (36%)
PTZ00169 21..297 CDD:240302 93/288 (32%)
Mito_carr 110..206 CDD:278578 33/97 (34%)
Solcar 2 111..201 32/91 (35%)
Solcar 3 210..295 26/91 (29%)
Mito_carr 215..300 CDD:278578 25/86 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0759
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54059
OrthoDB 1 1.010 - - D382447at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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