DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ucp4B and ucp-4

DIOPT Version :9

Sequence 1:NP_608977.1 Gene:Ucp4B / 33833 FlyBaseID:FBgn0031758 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_505414.1 Gene:ucp-4 / 179315 WormBaseID:WBGene00006729 Length:324 Species:Caenorhabditis elegans


Alignment Length:307 Identity:112/307 - (36%)
Similarity:180/307 - (58%) Gaps:18/307 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 YLTAFASACSAEIVGYPFDMCKTRMQIQGEIASRVGQKAKYRGLLATAMGIVREEGLLKLYGGIS 104
            |..:..:|..||.|.||.|:.|||:||       ...|....|::.....|:|.||.:.|:.|::
 Worm    27 YFLSCTAALVAETVTYPLDITKTRLQI-------ARNKFTKGGMVQVTYDIIRREGAMALWTGVA 84

  Fly   105 AMLFRHSLFSGIKMLTYDYMREKMIVPDEDGRPQLSFLGSCISGVLAGATASVLTNPTELIKIQM 169
            ..:.||.:::||:|..|:.:|  ::..:::.........|.:.|..:|..|....:||:|:|:||
 Worm    85 PAITRHYIYTGIRMGAYEQIR--LLTFNKEVEKSFPLWKSMLCGAFSGLIAQFAASPTDLVKVQM 147

  Fly   170 QMEGQRRLRGEPPRIHNVLQALTSIYRTGGVVGLWKGTVPNTWRSALVTIGDVSCYDFCKRFLIA 234
            ||||.|||:.:|.|.........|:|||.|..|||.|.:||..|:||:.:.|::.||..|..||.
 Worm   148 QMEGLRRLQKQPLRYTGATDCFRSLYRTQGFFGLWIGWMPNCQRAALLNMADIATYDSVKHGLID 212

  Fly   235 EFDLVDNREVQFVAAMTAGVADAILSLPADVVKSRIMNQPTDE-QGRGIH--------YKGSLDC 290
            .|:|.||.....||:..||:|.||:|||:||||:|:|:|...| ..:.:|        |||.:||
 Worm   213 NFELKDNWLTHAVASACAGLAAAIVSLPSDVVKTRMMDQIRHELDAKMMHKKNTHVDLYKGVVDC 277

  Fly   291 LSRLVREEGFLAMYKGFIPYWMRVGPASVVFWMTFEQIRRFRGSEGY 337
            ..::::.|||.::||||:|.::|:.|.|:.||:::|:||::.|:..:
 Worm   278 YIKIIKNEGFFSLYKGFLPSYIRMAPWSLTFWVSYEEIRKWTGASSF 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4BNP_608977.1 PTZ00169 32..306 CDD:240302 99/274 (36%)
Mito_carr 32..129 CDD:278578 28/88 (32%)
Mito_carr 138..233 CDD:278578 37/94 (39%)
Mito_carr 246..331 CDD:278578 40/93 (43%)
ucp-4NP_505414.1 PTZ00169 20..317 CDD:240302 110/298 (37%)
Mito_carr 22..111 CDD:278578 28/92 (30%)
Mito_carr 115..214 CDD:278578 39/98 (40%)
Mito_carr <240..318 CDD:278578 31/77 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166379
Domainoid 1 1.000 105 1.000 Domainoid score I4164
eggNOG 1 0.900 - - E1_KOG0759
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004436
OrthoInspector 1 1.000 - - otm14299
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45618
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3722
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.800

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