DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ucp4B and ucp3

DIOPT Version :10

Sequence 1:NP_608977.1 Gene:Ucp4B / 33833 FlyBaseID:FBgn0031758 Length:337 Species:Drosophila melanogaster
Sequence 2:XP_002942565.1 Gene:ucp3 / 100495495 XenbaseID:XB-GENE-6464668 Length:309 Species:Xenopus tropicalis


Alignment Length:306 Identity:101/306 - (33%)
Similarity:165/306 - (53%) Gaps:25/306 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KTPPVEL--YLTAFASACSAEIVGYPFDMCKTRMQIQGEIASRVGQKA-KYRGLLATAMGIVREE 94
            :.||..|  ::.|..:||.|::..:|.|..|.|:|||||..|....|. :|:|:..|...:|:.|
 Frog     8 EVPPTPLVKFVGAGTAACIADLFTFPLDTAKVRLQIQGEGTSVKDTKVLRYKGVFGTIKTMVKTE 72

  Fly    95 GLLKLYGGISAMLFRHSLFSGIKMLTYDYMREKMIVPDEDGRPQLSFLGSCISGVLAGATASVLT 159
            |...||.|:.|.|.|...|:.|::..||.:::......|........|..|.:    ||.|..|.
 Frog    73 GATSLYNGLVAGLQRQMSFASIRIGLYDSVKQFYCRQSESSGVACRLLAGCTT----GAMAVTLA 133

  Fly   160 NPTELIKIQMQ-----MEGQRRLRGEPPRIHNVLQALTSIYRTGGVVGLWKGTVPNTWRSALVTI 219
            .||:::|::.|     |:|:||..|       .:.|..:|.:..|:.||||||:.|..|:|:|..
 Frog   134 QPTDVVKVRFQAHIKVMDGERRYNG-------TVDAYKTIAKEEGLRGLWKGTIANITRNAIVNC 191

  Fly   220 GDVSCYDFCKRFLIAEFDLVDNREVQFVAAMTAGVADAILSLPADVVKSRIMNQPTDEQGRGIHY 284
            .::..||..|..::.:..:.||....||||..||....:::.|.||||:|.||.|..:      |
 Frog   192 AELVTYDLIKETILNQRLMTDNLPCHFVAAFGAGFCATVVASPVDVVKTRYMNSPAGQ------Y 250

  Fly   285 KGSLDCLSRLVREEGFLAMYKGFIPYWMRVGPASVVFWMTFEQIRR 330
            |.:|:|...::.:||.:|.||||:|.::|:|..::|.::::||::|
 Frog   251 KNALNCAFIMLVKEGSVAFYKGFMPAFLRLGSWNIVMFVSYEQLKR 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4BNP_608977.1 Mito_carr 32..129 CDD:395101 34/98 (35%)
Mito_carr 138..233 CDD:395101 31/99 (31%)
Mito_carr 246..331 CDD:395101 33/85 (39%)
ucp3XP_002942565.1 PTZ00169 14..299 CDD:240302 99/300 (33%)
Mito_carr 111..206 CDD:395101 32/105 (30%)

Return to query results.
Submit another query.