DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ucp4B and ucp1

DIOPT Version :9

Sequence 1:NP_608977.1 Gene:Ucp4B / 33833 FlyBaseID:FBgn0031758 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_001107354.1 Gene:ucp1 / 100135179 XenbaseID:XB-GENE-963773 Length:309 Species:Xenopus tropicalis


Alignment Length:298 Identity:102/298 - (34%)
Similarity:164/298 - (55%) Gaps:14/298 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 TPPVELYLTAFASACSAEIVGYPFDMCKTRMQIQGE-IASRVGQKAKYRGLLATAMGIVREEGLL 97
            ||.|: ::.|..:||.|::..:|.|..|.|:||||| ..|......:|:|:..|...||:.||..
 Frog    12 TPAVK-FIAAGTAACIADLFTFPLDTAKVRLQIQGETTGSGAANGIRYKGVFGTISTIVKTEGPK 75

  Fly    98 KLYGGISAMLFRHSLFSGIKMLTYDYMREKMIVPDEDGRPQLSFLGSCISGVLAGATASVLTNPT 162
            .||.|:.|.|.|...|:.|::..||.:  |:..  .:|:.:.......::|...||.|..:..||
 Frog    76 SLYNGLVAGLQRQMSFASIRIGLYDTV--KLFY--TNGKEKAGIGSRILAGCTTGALAVTVAQPT 136

  Fly   163 ELIKIQMQMEGQRRLRGEPPRIHNVLQALTSIYRTGGVVGLWKGTVPNTWRSALVTIGDVSCYDF 227
            :::|::.|  .|..|:|...|.:..:.|..:|.:..||.||||||.||..|:|:|...::..||.
 Frog   137 DVVKVRFQ--AQANLQGVKRRYNGTMDAYKTIAKKEGVRGLWKGTFPNVTRNAIVNCTELVTYDV 199

  Fly   228 CKRFLIAEFDLVDNREVQFVAAMTAGVADAILSLPADVVKSRIMNQPTDEQGRGIHYKGSLDCLS 292
            .|..|:....:.||....||:|..||....:::.|.||||:|.||.|..:      ||.:|:|..
 Frog   200 IKENLLHYKLMTDNLPCHFVSAFGAGFCTTVIASPVDVVKTRYMNSPPGQ------YKSALNCAW 258

  Fly   293 RLVREEGFLAMYKGFIPYWMRVGPASVVFWMTFEQIRR 330
            .::.:||..|.||||:|.::|:|..:||.::::||::|
 Frog   259 TMITKEGPTAFYKGFVPSFLRLGSWNVVMFVSYEQLKR 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4BNP_608977.1 PTZ00169 32..306 CDD:240302 91/272 (33%)
Mito_carr 32..129 CDD:278578 35/95 (37%)
Mito_carr 138..233 CDD:278578 30/94 (32%)
Mito_carr 246..331 CDD:278578 33/85 (39%)
ucp1NP_001107354.1 Mito_carr 10..110 CDD:278578 35/102 (34%)
PTZ00169 14..299 CDD:240302 100/296 (34%)
Mito_carr 111..208 CDD:278578 31/98 (32%)
Mito_carr 211..302 CDD:278578 35/92 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54059
OrthoDB 1 1.010 - - D382447at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.930

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