DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ucp4C and PNC2

DIOPT Version :9

Sequence 1:NP_608976.1 Gene:Ucp4C / 33832 FlyBaseID:FBgn0031757 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_198104.1 Gene:PNC2 / 832812 AraportID:AT5G27520 Length:321 Species:Arabidopsis thaliana


Alignment Length:298 Identity:68/298 - (22%)
Similarity:115/298 - (38%) Gaps:76/298 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 IGANLAESCVFPLDVAKTRMQ----VDGEQ-----------AKKTGKAMPTFRATLTNMIRVEGF 94
            ||:.|:.:.::|||..|::.|    |.|:|           |..:|..:                
plant    18 IGSLLSTTILYPLDTCKSKFQAEIRVRGQQKYRYLSDVFWEAISSGNVL---------------- 66

  Fly    95 KSLYAGFSAMVTRNFIFNSLRVVLYDVFRRPFLYQNERNEEVLKIYMALGCSFTAGCIAQALANP 159
             |||.|......::||.:.:....|..|:|  |:......:.:.....|..:..||.....|..|
plant    67 -SLYQGLGTKNLQSFISSFIYFYSYSYFKR--LHSQRIGSKSIGTKANLLIAAAAGACTSVLTQP 128

  Fly   160 FDIVKVRMQTE--GRRRQLGYDVRVNSMVQAFVDIYRRGGLPSMWKGVGPSCMRACLMTTGDVGS 222
            .|....||||.  |:.:.|...:...|...||             .|:|.|    .|:|:.....
plant   129 LDTASSRMQTSEFGKSKGLWKTLTDGSWGNAF-------------DGLGIS----LLLTSNPAIQ 176

  Fly   223 YDISKRTFKRLLDL------EEGLP------LRFVSSMCAGLTASVLSTPADVIKSRMMNQPVDE 275
            |.:..:..:.||:.      ::..|      :.||....:...|:|::.||  |:.::|.|..|:
plant   177 YTVFDQLKQNLLEKGKAKSNKDSSPVVLSAFMAFVLGAVSKSAATVITYPA--IRCKVMIQAADD 239

  Fly   276 SGKNLYYKNSLDCVRKLV--------REEGVLTLYKGL 305
            |.:| ..|.....:||.:        ::||:|..:|||
plant   240 SKEN-EAKKPRKRIRKTIPGVVYAIWKKEGILGFFKGL 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4CNP_608976.1 Mito_carr 49..124 CDD:278578 19/89 (21%)
Mito_carr 137..232 CDD:278578 21/96 (22%)
Mito_carr 237..329 CDD:278578 22/83 (27%)
PNC2NP_198104.1 Mito_carr 6..96 CDD:395101 22/96 (23%)
Mito_carr 110..191 CDD:395101 23/97 (24%)
Mito_carr 204..297 CDD:395101 21/76 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1126848at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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