DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ucp4C and CG1907

DIOPT Version :10

Sequence 1:NP_608976.1 Gene:Ucp4C / 33832 FlyBaseID:FBgn0031757 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_651703.1 Gene:CG1907 / 43483 FlyBaseID:FBgn0039674 Length:317 Species:Drosophila melanogaster


Alignment Length:331 Identity:98/331 - (29%)
Similarity:160/331 - (48%) Gaps:42/331 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LRSLEIEEEPRFPPTNVADPLTARNLFQLYVNTFIGANLAESCVFPLDVAKTRMQVDGEQAKKTG 75
            :.:..::|.|:        ...|.|..:.......|.. |...|.|||:.|||||:.|     .|
  Fly     1 MSATSVQEAPK--------KAVATNAIKFLFGGLSGMG-ATMVVQPLDLVKTRMQISG-----AG 51

  Fly    76 KAMPTFRATL---TNMIRVEGFKSLYAGFSAMVTRNFIFNSLRVVLY----DVFRRPFLYQNERN 133
            .....:|::|   ..::..||..:||.|..|.:.|...:.:.|:.:|    |:||..|    :|:
  Fly    52 SGKKEYRSSLHCIQTIVSKEGPLALYQGIGAALLRQATYTTGRLGMYTYLNDLFREKF----QRS 112

  Fly   134 EEVLKIYMALGCSFTAGCIAQALANPFDIVKVRMQTEGR-----RRQLGYDVRVNSMVQAFVDIY 193
            ..:.. .||:|.  .||.....:..|.::..|||.::||     ||      ...::..|...|.
  Fly   113 PGITD-SMAMGT--IAGACGAFIGTPAEVALVRMTSDGRLPVAERR------NYTNVANALARIT 168

  Fly   194 RRGGLPSMWKGVGPSCMRACLMTTGDVGSYDISKRTFKR-LLDLEEGLPLRFVSSMCAGLTASVL 257
            |..||.::|:|..|:..||.::....:.||...|..|:. .|.:|||:.|.|.:||.:||..::.
  Fly   169 REEGLTALWRGSLPTVGRAMVVNMTQLASYSQFKTYFRHGPLQMEEGIKLHFCASMLSGLLTTIT 233

  Fly   258 STPADVIKSRMMNQPVDESGKNLYYKNSLDCVRKLVREEGVLTLYKGLMPTWFRLGPFSVLFWLS 322
            |.|.|:.|:|:.|..:.: ||. .|:.:.|.:.::.|:|||..|:||..|.:.||||.:||.::.
  Fly   234 SMPLDIAKTRIQNMKMVD-GKP-EYRGTADVLLRVARQEGVFALWKGFTPYYCRLGPHTVLTFII 296

  Fly   323 VEQLRQ 328
            :|||.|
  Fly   297 LEQLNQ 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4CNP_608976.1 Mito_carr 49..124 CDD:395101 25/81 (31%)
Mito_carr 137..232 CDD:395101 27/99 (27%)
Mito_carr 237..329 CDD:395101 37/92 (40%)
CG1907NP_651703.1 Mito_carr 16..109 CDD:395101 28/98 (29%)
Mito_carr 118..207 CDD:395101 27/96 (28%)
Mito_carr 219..307 CDD:395101 33/86 (38%)

Return to query results.
Submit another query.