DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Ucp4C and Shawn

DIOPT Version :9

Sequence 1:	NP_608976.1	Gene:	Ucp4C / 33832	FlyBaseID:	FBgn0031757	Length:	335	Species:	Drosophila melanogaster
Sequence 2:	NP_001027071.1	Gene:	Shawn / 3772641	FlyBaseID:	FBgn0031039	Length:	387	Species:	Drosophila melanogaster

Alignment Length:	330	Identity:	71/330 - (21%)
Similarity:	117/330 - (35%)	Gaps:	121/330 - (36%)

- Green bases have known domain annotations that are detailed below.

  Fly    19 EPRF---PPTNVADPLTARNLFQLYVNTFIGANLAESCVFPLDVAKTRMQVDGEQAKKTGKAMPT 80
            :|||   |...||...|             ||.:....:.||||.|||:|...:
  Fly    32 DPRFRIRPLQQVASACT-------------GAMVTACFMTPLDVIKTRLQAQQQ----------- 72

  Fly    81 FRATLTNMIRVEGFKSLYAGFSAMVTRNFIFNSLRVVLYDVFRRPFLYQNERNEEVLKIYMALGC 145
              |.|:|                                    :.|||.|...:.:        |
  Fly    73 --ALLSN------------------------------------KCFLYCNGLMDHI--------C 91

  Fly   146 SFTAGCIAQALANPFDIVKVRMQTEGRRRQLGYDVRVNSMVQAFVDIYRRGGLPSMWKGVGPSCM 210
            .........|.|.|..                   |.:..:.||:.|.|..|:.|:|.|:.|:.:
  Fly    92 PCGPDTPNPAAAKPAP-------------------RFSGTIDAFIKISRTEGIGSLWSGLSPTLI 137

  Fly   211 RACLMTTGDVGSYDISKRTFK-RLLDLEEGL-------------PLRFVSSMCAGLTASVLS--- 258
            .|...|.    .|.::...|| |..|:....             |:.|:..:.||::..:|:
  Fly   138 SALPSTI----IYFVAYEQFKARFTDIHYKYTRRPDTIAHDIPHPIPFLVPLLAGVSGRILAVTC 198

  Fly   259 -TPADVIKSRMMNQPVDESGKNLYYKNSLDCVRKLVREEGVLTLYKGLMPTWFRLGPFSVLFWLS 322
             :|.::|:::|.:|       .:.:......:|::|:.:|||.|::||.||..|..|||.::|..
  Fly   199 VSPVELIRTKMQSQ-------RMTHAEMFGTIRQVVQSQGVLGLWRGLPPTILRDVPFSGIYWTC 256

  Fly   323 VEQLR 327
            .|.|:
  Fly   257 YEYLK 261

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Ucp4C	NP_608976.1	Mito_carr	49..124	CDD:278578	11/74 (15%)
		Mito_carr	137..232	CDD:278578	19/95 (20%)
		Mito_carr	237..329	CDD:278578	26/108 (24%)
Shawn	NP_001027071.1	Mito_carr	39..159	CDD:278578	41/212 (19%)
		Mito_carr	178..265	CDD:278578	26/91 (29%)
		Mito_carr	268..371	CDD:278578
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45441423
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930