DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ucp4C and MME1

DIOPT Version :9

Sequence 1:NP_608976.1 Gene:Ucp4C / 33832 FlyBaseID:FBgn0031757 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_609093.1 Gene:MME1 / 33987 FlyBaseID:FBgn0031881 Length:299 Species:Drosophila melanogaster


Alignment Length:343 Identity:85/343 - (24%)
Similarity:140/343 - (40%) Gaps:81/343 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LRSLEIEEEPRFPPTNVADPLTARNLFQLYVNTFIGANLAESC----VFPLDVAKTRMQVDGEQA 71
            :..:||..|.:..|                |.:||...:...|    ..|||..|.|:|      
  Fly     1 MEEVEISTEKKSNP----------------VKSFIAGGVGGMCNVLVGHPLDTIKVRLQ------ 43

  Fly    72 KKTGKAMPT--------FRATL---TNMIRVEGFKSLYAGFSAMVTRNFIFNSLRVVLYDVFRRP 125
                 .|||        ::..:   ....|.|||:..|.|.||.:.......::...:|...:|.
  Fly    44 -----TMPTPPPGQPPRYKGVIDCAARTFRYEGFRGFYRGISAPLVGVTPIYAVDFAVYAAGKRL 103

  Fly   126 FLYQNERNEEVLKIYMALGCSFTAGCIA---QALAN-PFDIVKVRMQTEG-RRRQLGYDVRVNSM 185
            |    :.::.:...|..:   |.||.:|   .||.. |.|.:||.:||:. ....|.|    |..
  Fly   104 F----QTDDHIRLTYPQI---FAAGALAGVCSALVTVPTDRIKVLLQTQTVSNGPLLY----NGT 157

  Fly   186 VQAFVDIYRRGGLPSMWKGVGPSCMRACLMTTGDVGSYDISKRTFKRLLDL----EEGLPLRFVS 246
            :.....:||:||:.|::||   :|  ||::.....|.|.:   |::.|.:|    .....:...|
  Fly   158 IDTAAKLYRQGGIRSLFKG---TC--ACILRDSPTGFYFV---TYEFLQELARKKSANGKISTTS 214

  Fly   247 SMCAGLTASV----LSTPADVIKSRMMNQPVDESGKNLYYKNSLDCV-RKLVREEGVLTLYKGLM 306
            ::.:|.||.:    |:.|.||:|||:.:.|...      ||:.:..| |.|:..||...|::|::
  Fly   215 TILSGGTAGIVFWTLAVPFDVLKSRLQSAPEGT------YKHGIRSVFRNLMATEGPKALFRGIL 273

  Fly   307 PTWFRLGPFSVLFWLSVE 324
            |...|..|.:...:..||
  Fly   274 PILLRAFPSTAAVFFGVE 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4CNP_608976.1 Mito_carr 49..124 CDD:278578 19/89 (21%)
Mito_carr 137..232 CDD:278578 29/99 (29%)
Mito_carr 237..329 CDD:278578 26/93 (28%)
MME1NP_609093.1 Mito_carr 10..107 CDD:278578 25/127 (20%)
Mito_carr 111..205 CDD:278578 31/108 (29%)
Mito_carr 208..297 CDD:278578 26/90 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441625
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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