DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ucp4C and colt

DIOPT Version :10

Sequence 1:NP_608976.1 Gene:Ucp4C / 33832 FlyBaseID:FBgn0031757 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_477221.1 Gene:colt / 33470 FlyBaseID:FBgn0019830 Length:306 Species:Drosophila melanogaster


Alignment Length:308 Identity:80/308 - (25%)
Similarity:134/308 - (43%) Gaps:54/308 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 VNTFIGANLAESC----VFPLDVAKTRMQ-----VDGEQAKKTGKAMPTFRATL---TNMIRVEG 93
            |.:|:.......|    ..|||..|.|:|     ..|||        |.:|.|.   ...|:.||
  Fly    16 VKSFLTGGFGGICNVLSGHPLDTIKVRLQTMPRPAPGEQ--------PLYRGTFDCAAKTIKNEG 72

  Fly    94 FKSLYAGFSAMVTRNFIFNSLRVVLYDVFRRPFLYQNERNEEVLKIY--MALGCSFTAGCIAQAL 156
            .:.||.|.||.:|......::....|.:.:|    ..:|.|:....|  :.:..|| :|..:..:
  Fly    73 VRGLYKGMSAPLTGVAPIFAMCFAGYALGKR----LQQRGEDAKLTYPQIFVAGSF-SGLFSTLI 132

  Fly   157 ANPFDIVKVRMQTEGRRRQLGYDVRVNSMVQAFVDIYRRGGLPSMWKGVGPSCMRACLMTTGDVG 221
            ..|.:.:||.:||:   :..|.:.:.|.|:.....:|:.|||.|::||       :|.....|:.
  Fly   133 MAPGERIKVLLQTQ---QGQGGERKYNGMIDCAGKLYKEGGLRSVFKG-------SCATMLRDLP 187

  Fly   222 SYDISKRTFKRLLDL-----EEGLPLRFVSSMCAGLTAS----VLSTPADVIKSRMMNQPVDESG 277
            :..:....::.|.|:     |.| .:...|::.||..|.    :|..||||:|||:.:.|...  
  Fly   188 ANGLYFLVYEALQDVAKSKSETG-QISTASTIFAGGVAGMAYWILGMPADVLKSRLQSAPEGT-- 249

  Fly   278 KNLYYKNSLDCVRK-LVREEGVLTLYKGLMPTWFRLGPFSVLFWLSVE 324
                ||:.:..|.| |:.::|.|.||:|:.|...|..|.:...:..:|
  Fly   250 ----YKHGIRSVFKDLIVKDGPLALYRGVTPIMLRAFPANAACFFGIE 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4CNP_608976.1 Mito_carr 49..124 CDD:395101 23/86 (27%)
Mito_carr 137..232 CDD:395101 21/96 (22%)
Mito_carr 237..329 CDD:395101 29/93 (31%)
coltNP_477221.1 Mito_carr 12..107 CDD:395101 26/102 (25%)
Mito_carr 112..202 CDD:395101 22/100 (22%)
Mito_carr 210..299 CDD:395101 28/91 (31%)

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