DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ucp4C and Ucp3

DIOPT Version :9

Sequence 1:NP_608976.1 Gene:Ucp4C / 33832 FlyBaseID:FBgn0031757 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_037299.1 Gene:Ucp3 / 25708 RGDID:3933 Length:308 Species:Rattus norvegicus


Alignment Length:322 Identity:106/322 - (32%)
Similarity:163/322 - (50%) Gaps:52/322 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PPTNVADPLTARNLFQLYVNTFIGAN----LAESCVFPLDVAKTRMQVDGEQAKKTGKAMPTFR- 82
            |||.|.              .|:||.    .|:...||||.||.|:|:.||   ..|.....:| 
  Rat    10 PPTTVV--------------KFLGAGTAACFADLLTFPLDTAKVRLQIQGE---NPGVQSVQYRG 57

  Fly    83 --ATLTNMIRVEGFKSLYAGFSAMVTRNFIFNSLRVVLYDVFRRPFLYQNERNEEVLKIYMALGC 145
              .|:..|:|.||.:|.|:|..|.:.|...|.|:|:.|||..:: |......:...:.|.:..||
  Rat    58 VLGTILTMVRTEGPRSPYSGLVAGLHRQMSFASIRIGLYDSVKQ-FYTPKGTDHSSVAIRILAGC 121

  Fly   146 SFTAGCIAQALANPFDIVKVRMQ------TEGRRRQLGYDVRVNSMVQAFVDIYRRGGLPSMWKG 204
              |.|.:|...|.|.|:||||.|      |.|.|:..|       .:.|:..|.|..|:..:|||
  Rat   122 --TTGAMAVTCAQPTDVVKVRFQAMIRLGTGGERKYRG-------TMDAYRTIAREEGVRGLWKG 177

  Fly   205 VGPSCMRACLMTTGDVGSYDISKRTFKRLLD---LEEGLPLRFVSSMCAGLTASVLSTPADVIKS 266
            ..|:..|..::...::.:|||.|   ::|||   ..:..|..|||:..||..|:|:::|.||:|:
  Rat   178 TWPNITRNAIVNCAEMVTYDIIK---EKLLDSHLFTDNFPCHFVSAFGAGFCATVVASPVDVVKT 239

  Fly   267 RMMNQPVDESGKNLYYKNSLDCVRKLVREEGVLTLYKGLMPTWFRLGPFSVLFWLSVEQLRQ 328
            |.||.|   .|:   |::.|.|:.::|.:||....|||.||::.|||.::|:.:::.|||::
  Rat   240 RYMNAP---PGR---YRSPLHCMLRMVAQEGPTAFYKGFMPSFLRLGSWNVMMFVTYEQLKR 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ucp4CNP_608976.1 Mito_carr 49..124 CDD:278578 29/77 (38%)
Mito_carr 137..232 CDD:278578 31/100 (31%)
Mito_carr 237..329 CDD:278578 35/92 (38%)
Ucp3NP_037299.1 Mito_carr 10..107 CDD:278578 37/114 (32%)
Solcar 1 11..102 35/108 (32%)
PTZ00169 13..298 CDD:240302 103/319 (32%)
Mito_carr 109..206 CDD:278578 33/108 (31%)
Solcar 2 111..202 31/102 (30%)
Mito_carr 209..299 CDD:278578 35/93 (38%)
Solcar 3 211..296 35/91 (38%)
Purine nucleotide binding. /evidence=ECO:0000250 275..297 7/21 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0759
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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