DRSC/TRiP Functional Genomics Resources

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Protein Alignment psd and YHR213W

DIOPT Version :9

Sequence 1:NP_001260116.1 Gene:psd / 33830 FlyBaseID:FBgn0086265 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_012083.1 Gene:YHR213W / 856620 SGDID:S000001256 Length:198 Species:Saccharomyces cerevisiae


Alignment Length:81 Identity:20/81 - (24%)
Similarity:23/81 - (28%) Gaps:33/81 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 YVAPAPQSPSY-----GGDGYGVLPNGGYI-------------KPDTEYNG--PGDGD------- 184
            |..| ||:.||     ..|...:|..||.:             ..|...||  |..|.       
Yeast     4 YFLP-PQTSSYTFRFAKVDDSAILSVGGNVAFECCAQEQPPITSTDFTINGIKPWQGSLPDNIGG 67

  Fly   185 -----AGYVAPAAPAY 195
                 |||..|....|
Yeast    68 TVYMYAGYYYPLKVVY 83

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
psdNP_001260116.1 None
YHR213WNP_012083.1 PA14 <1..110 CDD:415548 20/81 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2CM9P
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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