DRSC/TRiP Functional Genomics Resources

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Protein Alignment psd and FLO10

DIOPT Version :9

Sequence 1:NP_001260116.1 Gene:psd / 33830 FlyBaseID:FBgn0086265 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_013028.1 Gene:FLO10 / 853977 SGDID:S000001810 Length:1169 Species:Saccharomyces cerevisiae


Alignment Length:189 Identity:38/189 - (20%)
Similarity:60/189 - (31%) Gaps:53/189 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 YGVLPNGGYIKPDTEYNGPGDGDAGYVAPAAPAYEAPAPPAPAYEAPAPPAPAYEAPAPAAPAYE 226
            :|.||....:...||.|   |...|||.    :::..|..|.. ..|.|...|....:.|..::.
Yeast   250 WGTLPVSVVLPDGTEVN---DDFEGYVF----SFDDNATQAHC-SVPNPAEHARTCVSSATSSWS 306

  Fly   227 APAPAAPAYEAPTTDYSAPAPPAPAYEPP--ASSYTQGYSQPAQPSYVGAPPAQIVYQPIIYLST 289
            :........|..:|.|..|...:.::...  .:..|:..|......||                 
Yeast   307 SSEVCTECTETESTSYVTPYVTSSSWSSSEVCTECTETESTSTSTPYV----------------- 354

  Fly   290 PLASKSSTSQV-----EYDDQKYVTPTAPPPPPPPAPVYEAPSQNCYQPAAPPAPNYAT 343
             .:|.||:|:|     |.:...||||                    |..::..|.||.:
Yeast   355 -TSSSSSSSEVCTECTETESTSYVTP--------------------YVSSSTAAANYTS 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
psdNP_001260116.1 None
FLO10NP_013028.1 PA14 135..271 CDD:400161 7/23 (30%)
Flocculin_t3 937..980 CDD:404761
Flocculin_t3 996..1037 CDD:404761
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2CM9P
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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