DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vm26Aa and Vm34Ca

DIOPT Version :10

Sequence 1:NP_476783.1 Gene:Vm26Aa / 33829 FlyBaseID:FBgn0003979 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_476785.1 Gene:Vm34Ca / 34758 FlyBaseID:FBgn0003983 Length:119 Species:Drosophila melanogaster


Alignment Length:128 Identity:55/128 - (42%)
Similarity:63/128 - (49%) Gaps:34/128 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SFVCIALVAFAAAALASPTNVASATGSTGSSVTTQDGELEGVTGQGFGDLTRLRKSAYGG----- 62
            |.:|: |.||.||                   ..:|..|....|.|:|........:|..     
  Fly     8 STICL-LAAFVAA-------------------DKEDKMLGSSYGGGYGKPAAAPAPSYSAPAAAP 52

  Fly    63 ------SSGGYGGS--SIPAPPCPKNYLFSCQPNLAPVPCSAPAPSYGSAGAYSSPVATYVAP 117
                  ::..|..:  ||||||||||||||||||||||||||||||||||||||.....| ||
  Fly    53 QAYAAPAAPSYAAAPVSIPAPPCPKNYLFSCQPNLAPVPCSAPAPSYGSAGAYSQYAPVY-AP 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vm26AaNP_476783.1 Vitelline_membr 72..108 CDD:371125 35/35 (100%)
Vm34CaNP_476785.1 Vitelline_membr 70..106 CDD:371125 35/35 (100%)

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