DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vm26Aa and Vm26Ac

DIOPT Version :10

Sequence 1:NP_476783.1 Gene:Vm26Aa / 33829 FlyBaseID:FBgn0003979 Length:141 Species:Drosophila melanogaster
Sequence 2:NP_608973.1 Gene:Vm26Ac / 33828 FlyBaseID:FBgn0086266 Length:181 Species:Drosophila melanogaster


Alignment Length:171 Identity:37/171 - (21%)
Similarity:60/171 - (35%) Gaps:34/171 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   666 MDKITIAASAA----ICGTIIVAVIVFIAAS--RRSKKLQSLSQQKSALPIAGLPVNCCGPTPSP 724
            |.::.:.:|..    :.||.:....:.||:.  ...|..:|.. .|..|||.| .|:...|.|:.
  Fly     7 MSRLLVLSSVGFGGYLTGTYLERKRLTIASDYINTGKAAESFC-SKPGLPIFG-TVSAATPIPAD 69

  Fly   725 NGPLGSLATLSAFNSHKDWDQVSAYSGRSIPRPRIYPMENQAIPDDLRSHVSH--FSAVGGGGGG 787
            :.|       ||..:.....|:..|....:...|.:  ::..:..|.|:.|:|  |..:      
  Fly    70 SPP-------SAMVNVSRVGQIMKYGFPGLDNVRSF--DDYVLSYDRRTRVAHWVFEHL------ 119

  Fly   788 GVPKVGKARSIAD--------GQSHHSFSNHSQRGYLGSAF 820
             .|...|.....|        .:|.|.|.......|.||.|
  Fly   120 -TPATVKHNDAVDRAKCDFKPDESIHPFFRSLNTDYKGSGF 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vm26AaNP_476783.1 Vitelline_membr 72..108 CDD:371125
Vm26AcNP_608973.1 Vitelline_membr 155..>180 CDD:371125 3/5 (60%)
Blue background indicates that the domain is not in the aligned region.

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