DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vm26Ab and Vm26Aa

DIOPT Version :10

Sequence 1:NP_476784.1 Gene:Vm26Ab / 33827 FlyBaseID:FBgn0003980 Length:168 Species:Drosophila melanogaster
Sequence 2:NP_476783.1 Gene:Vm26Aa / 33829 FlyBaseID:FBgn0003979 Length:141 Species:Drosophila melanogaster


Alignment Length:53 Identity:40/53 - (75%)
Similarity:43/53 - (81%) Gaps:5/53 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 ASIPSPPCPKNYLFSCQPSLQPVPCSAPAQSYGSAGAYSQ----YV-PQYAVP 163
            :|||:|||||||||||||:|.||||||||.|||||||||.    || |.|.||
  Fly    70 SSIPAPPCPKNYLFSCQPNLAPVPCSAPAPSYGSAGAYSSPVATYVAPNYGVP 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vm26AbNP_476784.1 Vitelline_membr 118..154 CDD:371125 31/35 (89%)
Vm26AaNP_476783.1 Vitelline_membr 72..108 CDD:371125 31/35 (89%)

Return to query results.
Submit another query.