DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9044 and LRRCC1

DIOPT Version :10

Sequence 1:NP_001260114.1 Gene:CG9044 / 33825 FlyBaseID:FBgn0031752 Length:1318 Species:Drosophila melanogaster
Sequence 2:XP_016869409.1 Gene:LRRCC1 / 85444 HGNCID:29373 Length:1046 Species:Homo sapiens


Alignment Length:1040 Identity:195/1040 - (18%)
Similarity:347/1040 - (33%) Gaps:327/1040 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 GDNSNGFVW---------------NELKTADFSYNSLRSVDTALEFAQHLQHLNLRHNKLTSVAA 206
            ||:|.|.|.               :.|...:...|::..:: |::...:||||:|..|:::.:..
Human    19 GDSSCGDVCFMDKGLQSISELSLDSTLHAVNLHCNNISKIE-AIDHIWNLQHLDLSSNQISRIEG 82

  Fly   207 IKWLPHLKTLDLSYNCLTHLPQFHMEACKRLQLLNISNNYVEELLDVAKLDALYN----LDLSDN 267
            :..|..|.||:||.|.:|.:.  .:|....|..||:|.|::::|..:..|..:.:    :||..|
Human    83 LNTLTKLCTLNLSCNLITKVE--GLEELINLTRLNVSYNHIDDLSGLIPLHGIKHKLRYIDLHSN 145

  Fly   268 CLLEHSQLLPLSA---LMSLIVLNLQG--NPLACNP--------------KHRQATAQYLHKNSA 313
            .:.....||....   .::.::|...|  ||:...|              .:|....|.|.:.. 
Human   146 RIDSIHHLLQCMVGLHFLTNLILEKDGDDNPVCRLPGTSLNTVTLPSELRGYRAVILQTLPQLR- 209

  Fly   314 TVKFVLDF-----EPLTKAEKALTGSQKWRYISGLSHRSPRSTSMSINSSSASINTSDGSQFSSF 373
                :||.     ||:...|   ..|.:.:.:.||..        ::.||.:.:|.|:..     
Human   210 ----ILDCKNIFGEPVNLTE---INSSQLQCLEGLLD--------NLVSSDSPLNISEDE----- 254

  Fly   374 GSQRSVSIRGKNYTLEDNQSMDTSQSSKRISSCKIRTVDIEESSEINTDAASVSTPNPRSEYEEE 438
                          :.|...:.|:...:        .|.:|:.:...:||...|..:.....|.|
Human   255 --------------IIDRMPVITAPIDE--------LVPLEQFASTPSDAVLTSFMSVCQSSEPE 297

  Fly   439 PDNSHLETKKKIETLRLTYGNEWLKSGNAELMLGIETPQPTERERNESRQLFNEYLGELSGF--- 500
            .:|...:.:.:|:..:|.                           ::..||.||....:...   
Human   298 KNNHENDLQNEIKLQKLD---------------------------DQILQLLNETSNSIDNVLEK 335

  Fly   501 -------TEAKNDSEHHNIS----STPTNNVLLASTFDA-TITPIKSEANDTSGQTLYETCTEGE 553
                   |:..::|::.|..    ..|..:.:   .:|| ||..||.                 .
Human   336 DPRPKRDTDITSESDYGNRKECNRKVPRRSKI---PYDAKTIQTIKH-----------------H 380

  Fly   554 ETNYESFGNNTTELSTEERPPDRHEELLRLYASSSNA------QDEDP------VSDAESDEETY 606
            ..||.||    ...:.:.:||    .|..||.|||.|      :.|.|      |..:.|::.||
Human   381 NKNYNSF----VSCNRKMKPP----YLKELYVSSSLANCPMLQESEKPKTEIIKVDQSHSEDNTY 437

  Fly   607 IVYHEQKPSEVLFLTISSNFIREKDTLTERTKAKWSLKILESCERVRSNTLRINFDTMRK--DKQ 669
            ....||...|           |||         :|..:..|       |.|....|.:.|  :::
Human   438 QSLVEQLDQE-----------REK---------RWRAEQAE-------NKLMDYIDELHKHANEK 475

  Fly   670 ERIYCVENTLCQELEKKLRDIL--SQRDLTEMNISIYRCVNCLTQFTIEQKSKRYKAKELRCPDC 732
            |.|:    :|......:|::|:  .:....::.:.:::..|.:.:.|:|    ..|||     |.
Human   476 EDIH----SLALLTTDRLKEIIFRERNSKGQLEVMVHKLQNEIKKLTVE----LMKAK-----DQ 527

  Fly   733 RSVYVAEVTELSSSLSKPSGEVAAEPKLSPAMIVEESPVEELAAAINKEESNSIVANCRLTTAKI 797
            :..::..:..|..:|.|...:...:......:|.|   ||..|:|.::|                
Human   528 QEDHLKHLRTLEKTLEKMERQKRQQQAAQIRLIQE---VELKASAADRE---------------- 573

  Fly   798 TPKLRSLTQATKSSANSLNGSSSCSKITNSQSSFDSNQSVVGSSNTDRDM------EFRANESDV 856
            ...||:.....:..|..|: .....|....:...::.:..     ||.|.      |....|...
Human   574 IYLLRTSLHREREQAQQLH-QLLALKEQEHRKELETREFF-----TDADFQDALAKEIAKEEKKH 632

  Fly   857 DIISNPSQSSIEVLDPNYVQSASR----KTSEERRISQLPH-LETIHDEVAKSKSFIEREFGQLL 916
            :.:....|..|:||...|:...:.    .|.|.||...:.. .|.:..|:||||..:      :.
Human   633 EQMIKEYQEKIDVLSQQYMDLENEFRIALTVEARRFQDVKDGFENVATELAKSKHAL------IW 691

  Fly   917 AEQAQPTTPSTAAPLAPAKSAVPSHVPLTESSSSGSVTDSICTTYEQQA---------TDAPQNL 972
            |::                         .|:.||..:.|..|...||:.         .:...||
Human   692 AQR-------------------------KENESSSLIKDLTCMVKEQKTKLAEVSKLKQETAANL 731

  Fly   973 QNSLLTESSNSQVSGSDAESNS---RLKSAEDASLLPFASVFQSTNLLMSSSKKLIESEATVFGT 1034
            ||.:.|    .::...|.:..|   .|...|...|:...:..:|....:.:.:|:...|....|:
Human   732 QNQINT----LEILIEDDKQKSIQIELLKHEKVQLISELAAKESLIFGLRTERKVWGHELAQQGS 792

  Fly  1035 Q---------------------PYKFNYSDFNDIDHRLKLYFYQ----RKFK----EDGEHFKWL 1070
            .                     ..|.|.||.:.:..:.|:...|    ||.|    |..||.|.|
Human   793 SLAQNRGKLEAQIESLSRENECLRKTNESDSDALRIKCKIIDDQTETIRKLKDCLQEKDEHIKRL 857

  Fly  1071  1070
            Human   858  857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9044NP_001260114.1 LIP1 1..96 CDD:464931
leucine-rich repeat 168..190 CDD:275380 3/21 (14%)
PPP1R42 176..302 CDD:455733 34/148 (23%)
leucine-rich repeat 191..212 CDD:275380 7/20 (35%)
leucine-rich repeat 213..236 CDD:275380 8/22 (36%)
leucine-rich repeat 237..258 CDD:275380 7/20 (35%)
leucine-rich repeat 259..283 CDD:275380 5/30 (17%)
LRRCC1XP_016869409.1 PPP1R42 30..216 CDD:455733 40/193 (21%)
leucine-rich repeat 45..66 CDD:275378 3/21 (14%)
leucine-rich repeat 67..88 CDD:275378 7/20 (35%)
leucine-rich repeat 89..110 CDD:275378 8/22 (36%)
leucine-rich repeat 111..136 CDD:275378 7/24 (29%)
leucine-rich repeat 137..150 CDD:275378 3/12 (25%)
leucine-rich repeat 185..207 CDD:275380 3/21 (14%)
leucine-rich repeat 223..241 CDD:275380 4/28 (14%)
SMC_prok_B <426..>1044 CDD:274008 99/532 (19%)
Blue background indicates that the domain is not in the aligned region.

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