DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9044 and AT1G13230

DIOPT Version :9

Sequence 1:NP_001260114.1 Gene:CG9044 / 33825 FlyBaseID:FBgn0031752 Length:1318 Species:Drosophila melanogaster
Sequence 2:NP_172782.2 Gene:AT1G13230 / 837883 AraportID:AT1G13230 Length:424 Species:Arabidopsis thaliana


Alignment Length:287 Identity:64/287 - (22%)
Similarity:112/287 - (39%) Gaps:69/287 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 FAQHLQHLNLRHN---------------KLTSV------------AAIKWLPHLKTLDLSYNCLT 224
            ||.:|:.|..|.|               ||.|:            |:|..|..||.|..:.|...
plant   140 FASNLESLEFRSNPGLIGELPETIGNLTKLKSLVVLENGFSGELPASICNLKRLKRLVFAGNSFA 204

  Fly   225 HLPQFHMEACKRLQLLNISNNYVEELLDVA--KLDALYNLDLSDNCLLEHSQLLPLSALMSLIVL 287
            .:.....:..|.|.:|::|.|.....|..:  .|.:|..||||:| |||.:....|..|.:|.:|
plant   205 GMIPNCFKGLKELLILDLSRNSFSGTLPTSFGDLVSLLKLDLSNN-LLEGNLPQELGFLKNLTLL 268

  Fly   288 NLQGN----PLACNPKHRQATAQYLHKNSATVK--------------FVLDFEPL---TKAEKAL 331
            :|:.|    .|:.|.::.|:..:.:..|:...:              .|||...:   .:...:|
plant   269 DLRNNRFSGGLSKNIENIQSLTELVLSNNPMGEEDMVGTNWGKMSNLVVLDLSKMGLRGEIPTSL 333

  Fly   332 TGSQKWRYISGLSHRS-------------PRSTSMSINSSSASINTSDGSQF-SSFGSQRSVSIR 382
            |..::.|:: ||::.:             |...::.||.::.:......::| ...|.:...|  
plant   334 TNLKRLRFL-GLNNNNLTGFVPSKKLEALPCLGALYINGNNLTGELRFSTKFYEKMGRRFKAS-- 395

  Fly   383 GKNYTLEDNQSMDTSQSSKRISSCKIR 409
             ||..|.....|..|:|.|.:|...::
plant   396 -KNPNLCQPLEMVMSESHKHLSPLGVK 421

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG9044NP_001260114.1 LIP1 6..96 CDD:292526
LRR_RI <102..302 CDD:238064 40/147 (27%)
leucine-rich repeat 168..190 CDD:275380 2/2 (100%)
LRR_4 189..229 CDD:289563 14/66 (21%)
LRR_8 190..245 CDD:290566 18/81 (22%)
leucine-rich repeat 191..212 CDD:275380 10/47 (21%)
leucine-rich repeat 213..236 CDD:275380 4/22 (18%)
leucine-rich repeat 237..258 CDD:275380 6/22 (27%)
leucine-rich repeat 259..283 CDD:275380 11/23 (48%)
AT1G13230NP_172782.2 PLN03150 <56..214 CDD:178695 16/73 (22%)