DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9044 and nisch

DIOPT Version :9

Sequence 1:NP_001260114.1 Gene:CG9044 / 33825 FlyBaseID:FBgn0031752 Length:1318 Species:Drosophila melanogaster
Sequence 2:XP_002666276.2 Gene:nisch / 553087 ZFINID:ZDB-GENE-050208-570 Length:1406 Species:Danio rerio


Alignment Length:1453 Identity:300/1453 - (20%)
Similarity:509/1453 - (35%) Gaps:459/1453 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LANLLRQNGDKILSSEFTLTLSGSLLRALNDSFTLIADTEIGTGAGYLQPQSFQVVKPINAKSSV 73
            ||..|..||:::|::.....|....|                    |...|..::.||..|....
Zfish   125 LAEELFHNGEQLLAAGEVFLLKPLQL--------------------YAVTQQLRLAKPTCANGDA 169

  Fly    74 FPDLQLVHDFVQKTTLLKLTYFPSEHYFEGA---------IDIAKFRALRRLEVNKINIGQVVGI 129
            ..||..:.||   |..||....|.:....|.         .|::.|:||.::|::..:.||:.|:
Zfish   170 KADLGHILDF---TCRLKYLKIPGKKSTVGTSNIEEQSLLFDLSIFKALLQIEISDCDAGQIRGL 231

  Fly   130 QPLRGQLQHLICVKSLTSVDDIITRCGGDNSNGF-------------------VWNELKTADFSY 175
            ..|:..|..|....|..|:.:|:.    ..::.|                   .|..|.|.|.|.
Zfish   232 PSLKPTLATLSIHLSAKSMKEILV----PEASEFAQWEPEGVDTDCPVTAIIPTWKMLTTLDMSR 292

  Fly   176 NSLRSVDTALEFAQHLQHLNLRHNKLTSVAAIKWLPHLKTLDLSYNCLTHLPQFHMEACKRLQLL 240
            |.:|.:|.:::....::.|:|.||:|:.|..::.|.:|..||||:|.||.|...|.: ...::.|
Zfish   293 NYIRCIDESVKLIPEVEFLDLSHNELSLVENLEHLYNLVHLDLSFNKLTVLEGVHTK-LGNIKTL 356

  Fly   241 NISNNYVEELLDVAKLDALYNLDLSDNCLLEHSQLLPLSALMSLIVLNLQGNPLACNPKHR-QAT 304
            |:|.|.:|.|..::||.:|.|||||.|.|.:..::..:..|..|..|||..||:...|.:| :..
Zfish   357 NLSENQLETLSGLSKLYSLVNLDLSSNKLTQLDEIKHIGLLPCLEKLNLANNPMCIIPDYRTKVL 421

  Fly   305 AQYLHKNS-------ATVKFVLDFEPLTKA--------EKALTGSQKWRYISGLSHRSPRSTSMS 354
            ||:..:.|       .|.:..||...:.||        ::.:...:|...:.|.:...|:|:|.|
Zfish   422 AQFCDRASEVCLDATITTEKELDTVEVLKAIQKAKEAKDRMINNDKKVSDVPGQAAGGPQSSSSS 486

  Fly   355 I----NSSSASINTSDGSQFSSFGSQRSVSIRGKNYTLEDNQSMDTSQSSKRI-----SSCKI-- 408
            :    :|||.|::.|..|      ||...:.:.|.:..:|..:...|..::|.     |:|::  
Zfish   487 LVVPSSSSSPSLSRSTCS------SQEITTCKEKAFITKDILTPVDSTLTQRCYDVYSSACEVAP 545

  Fly   409 ---RTVDIEESSEINTDAASVSTPNPRSEYEEEPDNSHLE-------------TKKKIE---TLR 454
               ..||...|||:..:::|..     .|.|.:|..:.|.             ||::..   :.|
Zfish   546 QVQTQVDSGLSSEVTIESSSCC-----CEEEWKPWTTSLSNLIVPPSLLFYTTTKQEFTNQLSAR 605

  Fly   455 LTYGNEWLKSGNAELMLGIE-TPQPTERERNESRQLFNEYLGELSGFTEAKNDSEHHNISSTPTN 518
            :...|:            :| ||.|.:....|:....:...|:  |:.|...|.         ||
Zfish   606 ICQSNK------------VESTPVPCKTTLVETTDQGSPQSGD--GYFEMTLDD---------TN 647

  Fly   519 NVLLASTFDATI-----TPIKSEAND-----------TSGQTL--YETC------------TEGE 553
            .::..|: .:||     ..||..|:|           ::|:.|  :.||            |..|
Zfish   648 EIMGCSS-SSTIQEKGSDDIKESASDHVKTLVWGLCISAGEGLRQWPTCLVTTDSSLVVFHTHSE 711

  Fly   554 ETNYESFGNNTTELST-----EERPPDRHEELLRLYASSSNAQDEDPVSDAESDEE--TYIVYH- 610
            |...:...|...:|:.     |....|..|..|.|...|||.: ....|.|:|.:|  :|:..| 
Zfish   712 EPLSDLIENLEIDLAVPFTNIETLQFDIPEVCLSLKVKSSNKR-WFFFSGAQSLKEIHSYVSLHV 775

  Fly   611 EQKPSEVLFLTISSNFIREKDTLTERTKAKWSLKILESCERVRSNTL--RINFDTMRKDKQERIY 673
            :|...:||..:.:..|||:       ....|..:  ||...|:...|  .:|.|....||     
Zfish   776 DQTKEQVLNSSNTQTFIRQ-------FLNSWDFE--ESDGNVKGGHLIHFLNLDPSTSDK----- 826

  Fly   674 CVENTLCQELEKKLRDILSQRDLTEMNISIYRCVNCLTQFTIEQKSKRYKAKELRCPDCRSVYVA 738
               |........|..|:|||..|.|...|     |.:..|                         
Zfish   827 ---NVSNDPQFPKNSDVLSQIGLFEDQTS-----NPMILF------------------------- 858

  Fly   739 EVTELSSSLSKPSGEVAAEPKLSPAMIVEESPVEELAAAINKEESNSIVANCR------LTTAKI 797
             :|.....:.|                     ::.:|.|:.:....:|:.:|.      |:...:
Zfish   859 -LTSRHLCILK---------------------IDFVALALQESSEANIMRSCSKVIRIPLSFTLL 901

  Fly   798 TPKLRSLTQATKSSANSLNGSSSCSKITNSQSSFDSNQSVVGSSNTDRDMEFRANESDVDIISNP 862
            .||                ...||..|:||:..:|           |..:|..|....:.::...
Zfish   902 DPK----------------QGCSCKAISNSRRFYD-----------DHVLELMAGHEQLTVVFAL 939

  Fly   863 SQSSIEVLDPNYVQSASRKTSEERRISQLPHLETIHDEVAKSKSFIEREFGQLLAEQAQPTTPST 927
            .|.....|         |:....|  |.|..::||..:..|.        |.|.|...  ..|:|
Zfish   940 PQEKFTFL---------REFLLLR--SNLREIKTIALQRTKK--------GHLKAHNC--PVPAT 983

  Fly   928 AAPLAPAKSAVPSHVP---LT-------ESSSSGSVTDSICTTYEQQATDAPQNLQNSLLTESSN 982
            .....|. |::|..||   ||       :|.....:.|:.|.::        .:|.:||:..|| 
Zfish   984 TTQRIPT-SSIPQEVPKPHLTLSLLYPAKSLIQQLMEDNQCPSH--------LSLSSSLVLISS- 1038

  Fly   983 SQVSGSD---------AE-SNSRLKSAEDASLLPFASV-FQSTNLLMSSSKKL----------IE 1026
              :.|..         || .|..||.....|:|.:.|. .::|..::.|:|.:          :.
Zfish  1039 --LKGDQLVHFFHDNIAEMENEELKHILWTSVLFYRSPDVETTACVLLSNKAIYFILDDSASSLT 1101

  Fly  1027 SEATVFGTQPYKFNYSDFNDIDHRLKLYFYQRKFKEDGEHFKWLAKGRIYNEQTQSLGEGLV--- 1088
            :::.::..||.:...:||      |..:.:..|.|:                 .||:..||.   
Zfish  1102 NQSMMWTWQPSQNKDTDF------LVSFCFTLKLKD-----------------LQSVNVGLFDQF 1143

  Fly  1089 --VMSNCKCYLMEAFAEPHDDVAKWLRQVVSVAVNRLVAIDLLPWKLGLSFTLKDWGGFVLLLHD 1151
              ||.....:::...........::|:|::.|                                 
Zfish  1144 FRVMGPSADHIISCLTRDGYSTHRFLQQLMMV--------------------------------- 1175

  Fly  1152 MLRTESLLNYLQQIPLPEQCKLNH-----QPSVTLSHQWETIASEPVKMCSLIPSCQWICD---- 1207
                   |:.::::|.||..:.:.     ..|......:|.:.|..||.  :.||.:.|.|    
Zfish  1176 -------LSLVEKVPSPEPSEQDFYSQFGNKSTGKMENYELVHSSKVKF--VYPSEEEIGDLTFI 1231

  Fly  1208 -------QEKSSF----------------------EPSLLLITETHLYISGNGKFSWLSDKVQEK 1243
                   |..:||                      :|..|::|.|.:::......|:...:..::
Zfish  1232 VAERKTPQALTSFNILLYVLVFQVHVVPGPNKTVLQPKTLILTSTDVFLLDEDHISYPLPEFAKE 1296

  Fly  1244 PIQPELSLNQPLSNLVDVERITD 1266
            |.|.|      ...|.|..||.|
Zfish  1297 PPQRE------KYRLTDARRIRD 1313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9044NP_001260114.1 LIP1 6..96 CDD:292526 20/86 (23%)
LRR_RI <102..302 CDD:238064 66/228 (29%)
leucine-rich repeat 168..190 CDD:275380 7/21 (33%)
LRR_4 189..229 CDD:289563 16/39 (41%)
LRR_8 190..245 CDD:290566 20/54 (37%)
leucine-rich repeat 191..212 CDD:275380 7/20 (35%)
leucine-rich repeat 213..236 CDD:275380 10/22 (45%)
leucine-rich repeat 237..258 CDD:275380 8/20 (40%)
leucine-rich repeat 259..283 CDD:275380 9/23 (39%)
nischXP_002666276.2 PX_IRAS 10..125 CDD:132785 300/1453 (21%)
LRR_RI <285..408 CDD:238064 45/123 (37%)
LRR_8 285..340 CDD:290566 20/54 (37%)
leucine-rich repeat 285..307 CDD:275380 7/21 (33%)
leucine-rich repeat 308..329 CDD:275380 7/20 (35%)
LRR_8 329..385 CDD:290566 25/56 (45%)
leucine-rich repeat 330..352 CDD:275380 10/22 (45%)
LRR_4 352..393 CDD:289563 16/40 (40%)
leucine-rich repeat 353..374 CDD:275380 8/20 (40%)
leucine-rich repeat 375..399 CDD:275380 9/23 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3315
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

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