DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9044 and lrrc23

DIOPT Version :10

Sequence 1:NP_001260114.1 Gene:CG9044 / 33825 FlyBaseID:FBgn0031752 Length:1318 Species:Drosophila melanogaster
Sequence 2:XP_073794429.1 Gene:lrrc23 / 450033 ZFINID:ZDB-GENE-041010-153 Length:327 Species:Danio rerio


Alignment Length:350 Identity:81/350 - (23%)
Similarity:129/350 - (36%) Gaps:102/350 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 RQNGDKILSSEFTLTLSGSLLRALNDSFTLIADTEIGTGAGYLQPQSFQVVKPINAKSSVFPDLQ 78
            :.:||::.|...|..:       |..|.:|:..|..|....|::         ::.|:....||.
Zfish    28 KSDGDQLESCPLTQDI-------LARSLSLLCRTGNGLSHAYVR---------LDLKNKGLTDLA 76

  Fly    79 LVHDFVQKTTLLKLTYFPSEHYFEGAIDIAKFRALRRLEVNKINIGQVVGIQPLRGQLQHLICVK 143
            |:..|:.                           ||.|:::..::..   ..||.| |..|:.||
Zfish    77 LLSSFIH---------------------------LRYLDLSSNHLSD---FSPLAG-LTQLLWVK 110

  Fly   144 SLTSVDDIITRCGGDNS--NGFVWNELKTADF----SYNSLRSVDTALEFAQHLQHLNLRHNKLT 202
                         ||::  .||.........|    |..|.|..|........|:.|||..|.:.
Zfish   111 -------------GDSNLLQGFEGQPFGQLTFLQWLSIASNRLFDVKGLGGPALETLNLTGNGIQ 162

  Fly   203 SVAAIKW--LPHLKTLDLSYNCL-----THLPQFHMEACKRLQLLNISNNYVEELLDVAKLDALY 260
            ::..:.:  |.:|.||:|..|||     .:||        .|:.|.::.|.:::|..:.||:.|.
Zfish   163 TMQGLDYPNLTNLVTLELRGNCLETTDGIYLP--------NLRHLYLAQNNIKKLEGLEKLERLI 219

  Fly   261 NLDLSDNCLLEHSQLLPLSALMS----LIVLNLQGNPLACNPKHRQATAQYLHKNSATVK-FVLD 320
            .|.      |.|:||..|..|.:    |..||::||.::     .....|.|.....|:| .||.
Zfish   220 TLH------LRHNQLETLDGLSASMKCLEYLNVRGNLIS-----SMRALQTLASVGQTLKALVLL 273

  Fly   321 FEPLTKAEKALTGSQKWRYISGLSH 345
            ..|:.|     |...:...||.|.|
Zfish   274 DNPIAK-----TDDYRLYVISQLPH 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9044NP_001260114.1 LIP1 1..96 CDD:464931 15/81 (19%)
leucine-rich repeat 168..190 CDD:275380 5/25 (20%)
PPP1R42 176..302 CDD:455733 37/136 (27%)
leucine-rich repeat 191..212 CDD:275380 6/22 (27%)
leucine-rich repeat 213..236 CDD:275380 9/27 (33%)
leucine-rich repeat 237..258 CDD:275380 6/20 (30%)
leucine-rich repeat 259..283 CDD:275380 8/23 (35%)
lrrc23XP_073794429.1 None

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