DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh1 and gpsA

DIOPT Version :10

Sequence 1:NP_476565.1 Gene:Gpdh1 / 33824 FlyBaseID:FBgn0001128 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_418065.1 Gene:gpsA / 948125 ECOCYCID:EG20091 Length:339 Species:Escherichia coli


Alignment Length:331 Identity:87/331 - (26%)
Similarity:151/331 - (45%) Gaps:31/331 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NVCIVGSGNWGSAIAKIVGANAAALPEFEERVTMFVYEELIDGKKLTEI--INETHENVKYLKGH 68
            ::.::|:|::|:|:|..:..|.              :|.::.|.....|  :.....|..:|...
E. coli     7 SMTVIGAGSYGTALAITLARNG--------------HEVVLWGHDPEHIATLERDRCNAAFLPDV 57

  Fly    69 KLPPNVVAVPDLVEAAKNADILIFVVPHQFIPNFCKQLLGKIKPNAIAISLIKGFDKAEGGGIDL 133
            ..|..:....||..|...:..::.|||........:|:...::|:|..:...||.: ||.|  .|
E. coli    58 PFPDTLHLESDLATALAASRNILVVVPSHVFGEVLRQIKPLMRPDARLVWATKGLE-AETG--RL 119

  Fly   134 ISHIITRHL--KIPCAVLMGANLANEVAEGNFCETTIGCTDKKYGKVLRDLFQ-ANHFRVVVVDD 195
            :..:....|  :||.||:.|...|.|:|.|.....::..||:.:...|:.|.. ...|||....|
E. coli   120 LQDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTDQTFADDLQQLLHCGKSFRVYSNPD 184

  Fly   196 ADAVEVCGALKNIVACGAGFVDGLKLGDNTKAAVIRLGLMEMIRFVDVFYPGSKLSTFFESCGVA 260
            ...|::.||:||::|.|||..||:..|.|.:.|:|..||.||.|.....  |:..:||....|:.
E. coli   185 FIGVQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLAEMSRLGAAL--GADPATFMGMAGLG 247

  Fly   261 DLITTCYG--GRNRRVSEAFVTSGKTIEELEKEMLNGQKLQGPPTAEEVNYMLKNKGLEDKFPLF 323
            ||:.||..  .||||.. ..:..|..::..::::  ||.::|....:||..:....|:|  .|:.
E. coli   248 DLVLTCTDNQSRNRRFG-MMLGQGMDVQSAQEKI--GQVVEGYRNTKEVRELAHRFGVE--MPIT 307

  Fly   324 TAIHKI 329
            ..|:::
E. coli   308 EEIYQV 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh1NP_476565.1 glycerol3P_DH 6..343 CDD:274551 87/331 (26%)
gpsANP_418065.1 gpsA 6..330 CDD:234629 87/331 (26%)

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