DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh1 and GPD2

DIOPT Version :10

Sequence 1:NP_476565.1 Gene:Gpdh1 / 33824 FlyBaseID:FBgn0001128 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_014582.1 Gene:GPD2 / 854095 SGDID:S000005420 Length:440 Species:Saccharomyces cerevisiae


Alignment Length:356 Identity:162/356 - (45%)
Similarity:223/356 - (62%) Gaps:16/356 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VCIVGSGNWGSAIAKIVGANAAALPE-FEERVTMFVYEELIDGKKLTEIINETHENVKYLKGHKL 70
            |.::||||||:.|||::..|...... ||..|.|:|::|.|..:.||:|||..|:|||||....|
Yeast    86 VTVIGSGNWGTTIAKVIAENTELHSHIFEPEVRMWVFDEKIGDENLTDIINTRHQNVKYLPNIDL 150

  Fly    71 PPNVVAVPDLVEAAKNADILIFVVPHQFIPNFCKQLLGKIKPNAIAISLIKGFDKAEGGGIDLIS 135
            |.|:||.|||:.:.|.||||:|.:||||:||..|||.|.:.|:..|||.:|||:.. ..|:.|:|
Yeast   151 PHNLVADPDLLHSIKGADILVFNIPHQFLPNIVKQLQGHVAPHVRAISCLKGFELG-SKGVQLLS 214

  Fly   136 HIITRHLKIPCAVLMGANLANEVAEGNFCETTIGC-TDKKY--------GKVLRDLFQANHFRVV 191
            ..:|..|.|.|..|.|||||.|||:.::.|||:.. ..|.|        .|:|:.||...:|.|.
Yeast   215 SYVTDELGIQCGALSGANLAPEVAKEHWSETTVAYQLPKDYQGDGKDVDHKILKLLFHRPYFHVN 279

  Fly   192 VVDDADAVEVCGALKNIVACGAGFVDGLKLGDNTKAAVIRLGLMEMIRFVDVFYPGSKLSTFF-E 255
            |:||...:.:.|||||:||...|||:|:..|:|..||:.||||.|:|:|..:|:|.||:.|:: |
Yeast   280 VIDDVAGISIAGALKNVVALACGFVEGMGWGNNASAAIQRLGLGEIIKFGRMFFPESKVETYYQE 344

  Fly   256 SCGVADLITTCYGGRNRRVSEAFVTSGKTIEELEKEMLNGQKLQGPPTAEEVNYMLKNKGLEDKF 320
            |.|||||||||.||||.:|:.....:||:..|.|||:||||..||..|..||:..|:...|..:|
Yeast   345 SAGVADLITTCSGGRNVKVATYMAKTGKSALEAEKELLNGQSAQGIITCREVHEWLQTCELTQEF 409

  Fly   321 PLFTAIHKICTNQLKPNDLIDCIRNHPEHMD 351
            |||.|:::|..|.::..||.:.|    |.:|
Yeast   410 PLFEAVYQIVYNNVRMEDLPEMI----EELD 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh1NP_476565.1 glycerol3P_DH 6..343 CDD:274551 159/346 (46%)
GPD2NP_014582.1 glycerol3P_DH 85..432 CDD:274551 159/346 (46%)

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