DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh1 and GPD1

DIOPT Version :10

Sequence 1:NP_476565.1 Gene:Gpdh1 / 33824 FlyBaseID:FBgn0001128 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_010262.1 Gene:GPD1 / 851539 SGDID:S000002180 Length:391 Species:Saccharomyces cerevisiae


Alignment Length:356 Identity:168/356 - (47%)
Similarity:225/356 - (63%) Gaps:12/356 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VCIVGSGNWGSAIAKIVGANAAALPE-FEERVTMFVYEELIDGKKLTEIINETHENVKYLKGHKL 70
            |.::||||||:.|||:|..|....|| |...|.|:|:||.|:|:|||||||..|:|||||.|..|
Yeast    37 VTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITL 101

  Fly    71 PPNVVAVPDLVEAAKNADILIFVVPHQFIPNFCKQLLGKIKPNAIAISLIKGFDKAEGGGIDLIS 135
            |.|:||.|||:::.|:.||::|.:||||:|..|.||.|.:..:..|||.:|||: ....|:.|:|
Yeast   102 PDNLVANPDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFE-VGAKGVQLLS 165

  Fly   136 HIITRHLKIPCAVLMGANLANEVAEGNFCETTIGCTDKK---------YGKVLRDLFQANHFRVV 191
            ..||..|.|.|..|.|||:|.|||:.::.|||:.....|         ..|||:.||...:|.|.
Yeast   166 SYITEELGIQCGALSGANIATEVAQEHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPYFHVS 230

  Fly   192 VVDDADAVEVCGALKNIVACGAGFVDGLKLGDNTKAAVIRLGLMEMIRFVDVFYPGSKLSTFF-E 255
            |::|...:.:||||||:||.|.|||:||..|:|..||:.|:||.|:|||..:|:|.|:..|:: |
Yeast   231 VIEDVAGISICGALKNVVALGCGFVEGLGWGNNASAAIQRVGLGEIIRFGQMFFPESREETYYQE 295

  Fly   256 SCGVADLITTCYGGRNRRVSEAFVTSGKTIEELEKEMLNGQKLQGPPTAEEVNYMLKNKGLEDKF 320
            |.|||||||||.||||.:|:....||||...|.|||:||||..||..|.:||:..|:..|..:.|
Yeast   296 SAGVADLITTCAGGRNVKVARLMATSGKDAWECEKELLNGQSAQGLITCKEVHEWLETCGSVEDF 360

  Fly   321 PLFTAIHKICTNQLKPNDLIDCIRNHPEHMD 351
            |||.|:::|..|.....:|.|.|.....|.|
Yeast   361 PLFEAVYQIVYNNYPMKNLPDMIEELDLHED 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh1NP_476565.1 glycerol3P_DH 6..343 CDD:274551 165/346 (48%)
GPD1NP_010262.1 glycerol3P_DH 36..383 CDD:274551 165/346 (48%)

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