DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh1 and GPDHp

DIOPT Version :9

Sequence 1:NP_001260112.1 Gene:Gpdh1 / 33824 FlyBaseID:FBgn0001128 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_198877.1 Gene:GPDHp / 834060 AraportID:AT5G40610 Length:400 Species:Arabidopsis thaliana


Alignment Length:347 Identity:182/347 - (52%)
Similarity:241/347 - (69%) Gaps:7/347 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KVNVCIVGSGNWGSAIAKIVGANAAALPEFEERVTMFVYEELI-DGKKLTEIINETHENVKYLKG 67
            |..|.:||||||||..||::.:||..||.|.:.|.|:|:||:: :|:||.::||:|:||||||.|
plant    54 KSKVTVVGSGNWGSVAAKLIASNALKLPSFHDEVRMWVFEEVLPNGEKLNDVINKTNENVKYLPG 118

  Fly    68 HKLPPNVVAVPDLVEAAKNADILIFVVPHQFIPNFCKQLLGKIKPNAIAISLIKGFD-KAEGGGI 131
            .||..||||.|||..|.|:|::|:||.||||:...||:|.|||..:..||||:||.: |.||.  
plant   119 IKLGRNVVADPDLENAVKDANMLVFVTPHQFMDGICKKLDGKITGDVEAISLVKGMEVKKEGP-- 181

  Fly   132 DLISHIITRHLKIPCAVLMGANLANEVAEGNFCETTIGCT-DKKYGKVLRDLFQANHFRVVVVDD 195
            .:||.:|::.|.|.|.||||||:|||:|...|.|.|:|.. .::.......||...:|.|..|.|
plant   182 CMISSLISKQLGINCCVLMGANIANEIAVEKFSEATVGYRGSREIADTWVQLFSTPYFMVTPVHD 246

  Fly   196 ADAVEVCGALKNIVACGAGFVDGLKLGDNTKAAVIRLGLMEMIRFVDVFYPGSKLSTFFESCGVA 260
            .:.||:||.|||:||..|||||||::|:|||||::|:||.||.....:.:|..|.||||||||||
plant   247 VEGVELCGTLKNVVAIAAGFVDGLEMGNNTKAAIMRIGLREMKALSKLLFPSVKDSTFFESCGVA 311

  Fly   261 DLITTCYGGRNRRVSEAFVTS-GK-TIEELEKEMLNGQKLQGPPTAEEVNYMLKNKGLEDKFPLF 323
            |:||||.|||||||:|||..| || :.:|||.|||.||||||..||.||..:||:.|..:.||||
plant   312 DVITTCLGGRNRRVAEAFAKSRGKRSFDELEAEMLQGQKLQGVSTAREVYEVLKHCGWLEMFPLF 376

  Fly   324 TAIHKICTNQLKPNDLIDCIRN 345
            :.:|:|||.:|:|..::....|
plant   377 STVHQICTGRLQPEAIVQYREN 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh1NP_001260112.1 glycerol3P_DH 6..343 CDD:274551 180/341 (53%)
GPDHpNP_198877.1 glycerol3P_DH 56..395 CDD:274551 180/340 (53%)
NAD_Gly3P_dh_N 56..220 CDD:279543 87/165 (53%)
NAD_Gly3P_dh_C 247..390 CDD:284817 85/142 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 173 1.000 Domainoid score I1136
eggNOG 1 0.900 - - E1_COG0240
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 339 1.000 Inparanoid score I649
OMA 1 1.010 - - QHG56883
OrthoDB 1 1.010 - - D476066at2759
OrthoFinder 1 1.000 - - FOG0000846
OrthoInspector 1 1.000 - - otm3403
orthoMCL 1 0.900 - - OOG6_100385
Panther 1 1.100 - - LDO PTHR11728
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X660
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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