DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh1 and AT3G07690

DIOPT Version :9

Sequence 1:NP_001260112.1 Gene:Gpdh1 / 33824 FlyBaseID:FBgn0001128 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_187426.3 Gene:AT3G07690 / 819960 AraportID:AT3G07690 Length:466 Species:Arabidopsis thaliana


Alignment Length:388 Identity:93/388 - (23%)
Similarity:142/388 - (36%) Gaps:118/388 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DKVNVCIVGSGNWGSAIAKIVGANAAALPEFEERVTMFVYE---ELID---GKKLTEIINETHEN 61
            |.:.:..||:|.|||....::..|..   :|..:|::.::.   ..||   .:.|.|:||...|.
plant    33 DPLRIVGVGAGAWGSVFIAMLQENYG---KFRGKVSVRIWRRGGRAIDKATAEHLFEVINSREEL 94

  Fly    62 VK-------YLK-------------------GHKLPPNVVAVP--------DLVEAAKNADILIF 92
            ::       |||                   |..|  |::..|        :|.||..:|||:|.
plant    95 LRRLIRRCAYLKYVEARLGDRVLYADEILKDGFCL--NMIETPLCPLKVVTNLQEAVWDADIVIN 157

  Fly    93 VVP----HQFIPNFCKQLLGKIKPNA-IAISLIKGFDKAE---GGGIDLISHIITRHLKIPCAVL 149
            .:|    .|......|  ..|.:.|| :.|||.||.: ||   ...|...:.:|.|...||...:
plant   158 GLPSTETFQVFNEISK--YWKERVNAPVIISLAKGVE-AEFEPHPRIVTPTQMIHRATGIPLENI 219

  Fly   150 M---GANLANEVAEGNFCETTIGCTDKKYGKVLRDLFQANHFRVVVVDDADAV--EVCGALKNIV 209
            :   |.|:|:||....:....| |..:|:.|.|....:.:||  :|.|::|.:  ||.|.|||:.
plant   220 LYLGGPNIASEVYNKEYANARI-CGSEKWRKPLGKFLRQSHF--IVWDNSDLITHEVMGGLKNVY 281

  Fly   210 ACGAGFVDGLKLGDNTKAAVIRLGLMEMIRFVDVFYPGSKLSTFFESCG---------------- 258
            |.||.||..........|.:.:             ...:..|.:|..|.                
plant   282 AIGAVFVLAFLYSTGMVATLTK-------------ESATSKSVYFAHCTSEMIFITHLLAKEPEK 333

  Fly   259 -----VADLITTCYGGRNRRVSEAFVTSGKTIEELEKEMLNGQKLQGPPTAEEVNYMLKNKGL 316
                 :||...|...|||                    ...||||.....:.|:...:|.||:
plant   334 LAGPLLADTYVTLLKGRN--------------------AWYGQKLAKGELSLEMGDSIKGKGM 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh1NP_001260112.1 glycerol3P_DH 6..343 CDD:274551 92/385 (24%)
AT3G07690NP_187426.3 GpsA 34..423 CDD:223318 92/387 (24%)
NADB_Rossmann 40..231 CDD:304358 51/198 (26%)
NAD_Gly3P_dh_C 268..422 CDD:284817 29/142 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0240
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D476066at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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