DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh1 and GPDHC1

DIOPT Version :10

Sequence 1:NP_476565.1 Gene:Gpdh1 / 33824 FlyBaseID:FBgn0001128 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_181685.1 Gene:GPDHC1 / 818752 AraportID:AT2G41540 Length:462 Species:Arabidopsis thaliana


Alignment Length:456 Identity:101/456 - (22%)
Similarity:161/456 - (35%) Gaps:156/456 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DKVNVCIVGSGNWGSAIAKIVGANAAALPEFEERVTMFVYE---ELID---GKKLTEIINETHEN 61
            |.:.:..||:|.|||..|.::..:...   |.::..:.::.   ..:|   .:.|.|:||...:.
plant    40 DPLRIVSVGAGAWGSVFAALLQESYGG---FRDKFQIRIWRRAGRAVDRETAEHLFEVINSREDI 101

  Fly    62 VK-------YLK-------------------GHKLPPNVVAVP--------DLVEAAKNADILIF 92
            ::       |||                   |..|  |:|..|        :|.||..:|||::.
plant   102 LRRLIRRCAYLKYVEARLGDRTLYADEILKDGFCL--NMVDTPLCPLKVVTNLQEAVWDADIVVN 164

  Fly    93 VVP-------HQFIPNFCKQLLGKIKPNAIAISLIKGFDKAEGGGIDLISHIITRHLKIPCAV-- 148
            .:|       .:.|..:.|:.:    ...|.|||.||.:.|    ::.:.||||....|..|.  
plant   165 GLPSTETREVFEEISKYWKERI----TVPIIISLSKGIETA----LEPVPHIITPTKMIHQATGV 221

  Fly   149 -------LMGANLANEVAEGNFCETTIGCTDKKYGKVLRDLFQANHFRVVVVDDADAV--EVCGA 204
                   |.|.|:|.|:....:....| |...|:.|.|....:..||  :|.|::|.|  ||.|.
plant   222 PIDNVLYLGGPNIAAEIYNKEYANARI-CGAAKWRKPLAKFLRQPHF--IVWDNSDLVTHEVMGG 283

  Fly   205 LKNIVACGAGFVDGLKLGDNTKAAVIRLGLMEMIRFVDVFYPGSKLSTFFESCG----------- 258
            |||:.|.|||.|..|   .|..|.                   || |.:|..|.           
plant   284 LKNVYAIGAGMVAAL---TNESAT-------------------SK-SVYFAHCTSEMIFITHLLA 325

  Fly   259 ----------VADLITTCYGGRNRRVSEAFVTSGKTIEELEKEM---LNGQ-KLQGPPTAEEVNY 309
                      :||...|...|||....:.....     |:.::|   ::|: .:||.........
plant   326 EEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKG-----EINRDMGDSISGKGMIQGVSAVGAFYQ 385

  Fly   310 MLKNKGL-----EDK--------FPLFTAIHKICTNQLK----------------PNDLIDCIRN 345
            :|....|     |:|        .|:...::||...:.:                |.|.|:..::
plant   386 LLSQSSLSILPSEEKKPVAPVESCPILKTLYKILITREQSTQAILQALRDETLNDPRDRIEIAQS 450

  Fly   346 H 346
            |
plant   451 H 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh1NP_476565.1 glycerol3P_DH 6..343 CDD:274551 99/448 (22%)
GPDHC1NP_181685.1 GpsA 43..419 CDD:440010 95/419 (23%)

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