DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh1 and gpd1l

DIOPT Version :10

Sequence 1:NP_476565.1 Gene:Gpdh1 / 33824 FlyBaseID:FBgn0001128 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001005934.1 Gene:gpd1l / 449663 ZFINID:ZDB-GENE-041010-220 Length:351 Species:Danio rerio


Alignment Length:353 Identity:220/353 - (62%)
Similarity:267/353 - (75%) Gaps:5/353 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADKVNVCIVGSGNWGSAIAKIVGANAAALPEFEERVTMFVYEELIDGKKLTEIINETHENVKYL 65
            ||..:.||||||||||||||:|:|:||..|..|...|.|:||||:::||||:||||..|||||||
Zfish     1 MAAPLKVCIVGSGNWGSAIARIIGSNAQKLQCFATTVKMWVYEEMVNGKKLSEIINTEHENVKYL 65

  Fly    66 KGHKLPPNVVAVPDLVEAAKNADILIFVVPHQFIPNFCKQLLGKIKPNAIAISLIKGFDKAEG-G 129
            .|:|||.||||||.|.:||..||:|:||||||||...|.:::|.:...|..|:||||.|  || .
Zfish    66 PGYKLPENVVAVPQLRDAADGADLLVFVVPHQFIRKLCDEMMGCVSERARGITLIKGID--EGPE 128

  Fly   130 GIDLISHIITRHLKIPCAVLMGANLANEVAEGNFCETTIGCTDKKYGKVLRDLFQANHFRVVVVD 194
            |:.|||.||...:.|..:||||||:|||||...|||:|||....:.|.:.:||.|..:||:.|||
Zfish   129 GLKLISDIIREKMGIDVSVLMGANIANEVAAEKFCESTIGSKVLENGLLFKDLLQTPNFRITVVD 193

  Fly   195 DADAVEVCGALKNIVACGAGFVDGLKLGDNTKAAVIRLGLMEMIRFVDVFYPGSKLS--TFFESC 257
            |||.||:|||||||||.||||.|||:.|||||||||||||||||.|..:|.....:|  ||.|||
Zfish   194 DADTVELCGALKNIVAVGAGFCDGLQCGDNTKAAVIRLGLMEMIAFAKLFSKDDSVSSATFLESC 258

  Fly   258 GVADLITTCYGGRNRRVSEAFVTSGKTIEELEKEMLNGQKLQGPPTAEEVNYMLKNKGLEDKFPL 322
            |||||||||||||||||:|||..:||:|||||||||||||||||.|:.||.::||.|||.:||||
Zfish   259 GVADLITTCYGGRNRRVAEAFAKTGKSIEELEKEMLNGQKLQGPLTSAEVYHILKQKGLVEKFPL 323

  Fly   323 FTAIHKICTNQLKPNDLIDCIRNHPEHM 350
            |||:::||.......|:|.|:::||||:
Zfish   324 FTAVYQICFEDKPVRDMITCLQSHPEHL 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh1NP_476565.1 glycerol3P_DH 6..343 CDD:274551 213/339 (63%)
gpd1lNP_001005934.1 glycerol3P_DH 6..344 CDD:274551 213/339 (63%)

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