DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh1 and Gpdh3

DIOPT Version :9

Sequence 1:NP_001260112.1 Gene:Gpdh1 / 33824 FlyBaseID:FBgn0001128 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_732726.2 Gene:Gpdh3 / 42624 FlyBaseID:FBgn0263048 Length:1304 Species:Drosophila melanogaster


Alignment Length:354 Identity:169/354 - (47%)
Similarity:245/354 - (69%) Gaps:1/354 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADKVNVCIVGSGNWGSAIAKIVGANAAALPEFEERVTMFVYEELIDGKKLTEIINETHENVKYL 65
            ||.|:.:||:|:..||||||.:|..|... .:|:.||.::||:|:|....|:||||..|||||||
  Fly     1 MAGKLKICIIGAEGWGSAIAAVVSNNVLE-GDFDSRVHLYVYDEMIRDTALSEIINTRHENVKYL 64

  Fly    66 KGHKLPPNVVAVPDLVEAAKNADILIFVVPHQFIPNFCKQLLGKIKPNAIAISLIKGFDKAEGGG 130
            .|.|||.|::||.||:|||:|||||:|..|.:|:.::|..|.|.:|.:|.|:|:.||.....|.|
  Fly    65 PGIKLPNNLIAVNDLLEAAQNADILVFSTPLEFVQSYCNILSGNVKESAFAVSMTKGLLSENGEG 129

  Fly   131 IDLISHIITRHLKIPCAVLMGANLANEVAEGNFCETTIGCTDKKYGKVLRDLFQANHFRVVVVDD 195
            |:|:||.|:..|.|||..:|.|:.|.|:|:|..||.||||:|..:.|:|....|.|:.||:.|:|
  Fly   130 IELVSHAISESLGIPCYSMMSAHSAMEMAQGKLCEVTIGCSDNSHSKLLISAMQTNNCRVISVND 194

  Fly   196 ADAVEVCGALKNIVACGAGFVDGLKLGDNTKAAVIRLGLMEMIRFVDVFYPGSKLSTFFESCGVA 260
            .|.||:||.|.::||.||||:|||:||:|.:.|.|.||:.|::||:..|:|.||:|||:|||||.
  Fly   195 VDGVELCGTLTDVVALGAGFIDGLRLGENARLAAIHLGVKEIMRFIKTFFPSSKMSTFYESCGVT 259

  Fly   261 DLITTCYGGRNRRVSEAFVTSGKTIEELEKEMLNGQKLQGPPTAEEVNYMLKNKGLEDKFPLFTA 325
            :.:.:.:..:|...:::.||||:||||:|..:.:|:||.||..|..||..|:|..::.:||||||
  Fly   260 NAVASSFVDKNVTFAKSLVTSGQTIEEIEANLHSGRKLLGPMVASNVNAFLENGLMQHEFPLFTA 324

  Fly   326 IHKICTNQLKPNDLIDCIRNHPEHMDTSI 354
            ||.||.::..|..:|:.:||||:...:||
  Fly   325 IHLICQSEAPPELMIEALRNHPDLSSSSI 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh1NP_001260112.1 glycerol3P_DH 6..343 CDD:274551 160/336 (48%)
Gpdh3NP_732726.2 glycerol3P_DH 6..342 CDD:274551 160/336 (48%)
NADB_Rossmann 6..174 CDD:304358 83/168 (49%)
NAD_Gly3P_dh_C 195..336 CDD:284817 67/140 (48%)
BCOR <961..1109 CDD:292436
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45473020
Domainoid 1 1.000 63 1.000 Domainoid score I567
eggNOG 1 0.900 - - E1_COG0240
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D346303at33208
OrthoFinder 1 1.000 - - FOG0000846
OrthoInspector 1 1.000 - - otm51337
orthoMCL 1 0.900 - - OOG6_100385
Panther 1 1.100 - - P PTHR11728
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.750

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