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Protein Alignment Gpdh1 and Su(var)3-7
DIOPT Version :9
Sequence 1: | NP_001260112.1 |
Gene: | Gpdh1 / 33824 |
FlyBaseID: | FBgn0001128 |
Length: | 360 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_524342.3 |
Gene: | Su(var)3-7 / 41627 |
FlyBaseID: | FBgn0003598 |
Length: | 1250 |
Species: | Drosophila melanogaster |
Alignment Length: | 113 |
Identity: | 26/113 - (23%) |
Similarity: | 37/113 - (32%) |
Gaps: | 34/113 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 201 VCGALKNIVACGAGFVDGLKLGDNTKAAVIRLGLMEMIRFVDVFYPGSKLSTFFESCGVADLITT 265
:|....|: .||...|..:.|| |.||.:|.:|......|
Fly 321 ICSVRMNV-----EFVYLRKRHETTK------GHMEALRNLDSDKRSRK---------------- 358
Fly 266 CYGGRNRRVSEAFVTSGKTIEELEKEMLNGQKLQGPPTAEEVNYMLKN 313
|.|..|.:...||....|.||| .:...||..|::...::.|
Fly 359 ----RKRSKSNSVTNSGGDEAEREKE---SEPEVGPEDAQDTPVVMMN 399
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Gpdh1 | NP_001260112.1 |
glycerol3P_DH |
6..343 |
CDD:274551 |
26/113 (23%) |
Su(var)3-7 | NP_524342.3 |
BESS |
991..1021 |
CDD:281011 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR11728 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
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