DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh1 and gpd1l

DIOPT Version :10

Sequence 1:NP_476565.1 Gene:Gpdh1 / 33824 FlyBaseID:FBgn0001128 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_989027.1 Gene:gpd1l / 394623 XenbaseID:XB-GENE-969902 Length:352 Species:Xenopus tropicalis


Alignment Length:352 Identity:220/352 - (62%)
Similarity:272/352 - (77%) Gaps:4/352 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADKVNVCIVGSGNWGSAIAKIVGANAAALPEFEERVTMFVYEELIDGKKLTEIINETHENVKYL 65
            :|..:.||||||||||||:|||:|.|...|.:|...|.|:|:||.|:|:|||||||..|||||||
 Frog     3 LAGPLKVCIVGSGNWGSAVAKIIGHNVKNLKKFASTVNMWVFEENINGRKLTEIINTEHENVKYL 67

  Fly    66 KGHKLPPNVVAVPDLVEAAKNADILIFVVPHQFIPNFCKQLLGKIKPNAIAISLIKGFDKAEG-G 129
            .|:|||.||||||:|.:|.|:||:||||:|||||...|:::.||:..||:.|:||||.|  || .
 Frog    68 PGYKLPENVVAVPNLSDAVKDADLLIFVIPHQFIHKICQEISGKVHRNALGITLIKGID--EGPE 130

  Fly   130 GIDLISHIITRHLKIPCAVLMGANLANEVAEGNFCETTIGCTDKKYGKVLRDLFQANHFRVVVVD 194
            |:.|||.||...:.|..:||||||:|||||...|||||||..:|::|.:.::|.|..:||:.||:
 Frog   131 GLRLISDIIREKMDIDVSVLMGANIANEVAAEKFCETTIGSKNKEHGLLFKELLQTPNFRITVVE 195

  Fly   195 DADAVEVCGALKNIVACGAGFVDGLKLGDNTKAAVIRLGLMEMIRFVDVFYPGS-KLSTFFESCG 258
            |||.||:|||||||||..|||.|||..|||||||||||||||||.|.:||..|. .::||.||||
 Frog   196 DADTVELCGALKNIVAVAAGFCDGLGCGDNTKAAVIRLGLMEMIAFANVFCKGPVSIATFLESCG 260

  Fly   259 VADLITTCYGGRNRRVSEAFVTSGKTIEELEKEMLNGQKLQGPPTAEEVNYMLKNKGLEDKFPLF 323
            ||||||||||||||:||||||.|||:|||||||||||||||||.|:.||..:|:.|.:.:|||||
 Frog   261 VADLITTCYGGRNRKVSEAFVKSGKSIEELEKEMLNGQKLQGPQTSAEVYRILQQKNMVNKFPLF 325

  Fly   324 TAIHKICTNQLKPNDLIDCIRNHPEHM 350
            ||:::||.......|:|.|:::|||||
 Frog   326 TAVYQICYEGKPVEDVISCLQSHPEHM 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh1NP_476565.1 glycerol3P_DH 6..343 CDD:274551 213/338 (63%)
gpd1lNP_989027.1 glycerol3P_DH 8..345 CDD:274551 213/338 (63%)

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