DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh1 and Gpdh2

DIOPT Version :10

Sequence 1:NP_476565.1 Gene:Gpdh1 / 33824 FlyBaseID:FBgn0001128 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_611760.2 Gene:Gpdh2 / 37672 FlyBaseID:FBgn0034825 Length:358 Species:Drosophila melanogaster


Alignment Length:353 Identity:187/353 - (52%)
Similarity:258/353 - (73%) Gaps:6/353 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DKVNVCIVGSGNWGSAIAKIVGANAAALPEFEERVTMFVYEELIDGKKLTEIINETHENVKYLKG 67
            ||:.:||:|||||.:.||:.||.|.......:|:|.|:||||:::|:|||||||.||.|.||:..
  Fly     2 DKIMICIIGSGNWATTIARNVGRNVLNSQTLDEKVPMYVYEEIVEGRKLTEIINTTHINSKYMPN 66

  Fly    68 HKLPPNVVAVPDLVEAAKNADILIFVVPHQFIPNFCKQLLGKIKPNAIAISLIKGFDKAEGGGID 132
            .:||||:|||.|:|..|::|||:||.:|..|:.:.||.||||:||.|.|:||||||::.:.|...
  Fly    67 FELPPNIVAVDDIVTTARDADIIIFAIPPTFVSSCCKTLLGKVKPTAHAVSLIKGFERGDDGQFV 131

  Fly   133 LISHIITRHLKIPCAVLMGANLANEVAEGNFCETTIGCTDKKYGKVLRDLFQANHFRVVVVDDAD 197
            |||.||.|.|||||:||:|.|||:|:|..:|.|.|:||.|:||.:||.|:|::..|||||.:|||
  Fly   132 LISQIIMRQLKIPCSVLVGCNLAHELAHDHFAEGTVGCRDQKYYRVLHDIFKSPTFRVVVTEDAD 196

  Fly   198 AVEVCGALKNIVACGAGFVDGLKLGDNTKAAVIRLGLMEMIRFVDVFYPGSKLSTFFESCGVADL 262
            .||:|..|:||:|..||..||::|.:|||..:||.|.:||::||||||||.::.|||||||::||
  Fly   197 CVEICSTLRNIIAFAAGCSDGMELNENTKGGIIRRGFLEMLQFVDVFYPGCRMGTFFESCGISDL 261

  Fly   263 ITTCYGGRNRRVSEAFVTSGKTIEELEKEMLNGQKLQGPPTAEEVNYMLKNKGLEDKFPLFTAIH 327
            :|:||..|||:::||||.:||.:.|||..::.|.:..||.|||.|::|||.|||||||||||.::
  Fly   262 VTSCYANRNRKLAEAFVKTGKPLSELEHILIPGHEPLGPVTAELVHHMLKKKGLEDKFPLFTTVY 326

  Fly   328 KICTNQLKPNDLIDCIRN------HPEH 349
            :|||.......|::.:..      ||.|
  Fly   327 RICTGDYPLQRLVETLIKAREDIFHPLH 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh1NP_476565.1 glycerol3P_DH 6..343 CDD:274551 182/336 (54%)
Gpdh2NP_611760.2 glycerol3P_DH 6..342 CDD:274551 182/335 (54%)

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