DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh1 and gpd1b

DIOPT Version :10

Sequence 1:NP_476565.1 Gene:Gpdh1 / 33824 FlyBaseID:FBgn0001128 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_956000.1 Gene:gpd1b / 325181 ZFINID:ZDB-GENE-030131-3906 Length:350 Species:Danio rerio


Alignment Length:353 Identity:231/353 - (65%)
Similarity:273/353 - (77%) Gaps:6/353 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADKVNVCIVGSGNWGSAIAKIVGANAAALPEFEERVTMFVYEELIDGKKLTEIINETHENVKYL 65
            ||.| .:||:||||||||||||||||||....||..|.|:|:||:|:|:|||||||..|||||||
Zfish     1 MAAK-KICIIGSGNWGSAIAKIVGANAAKYNTFENTVNMWVFEEMINGRKLTEIINTEHENVKYL 64

  Fly    66 KGHKLPPNVVAVPDLVEAAKNADILIFVVPHQFIPNFCKQLLGKIKPNAIAISLIKGFDKAEG-G 129
            .||||||||:|||||:|:.|.|||||||:||||:...|..:.|.|||:|:.:|||||.|  || .
Zfish    65 PGHKLPPNVLAVPDLLESVKGADILIFVIPHQFVSRICDTIKGHIKPDAVGMSLIKGVD--EGPD 127

  Fly   130 GIDLISHIITRHLKIPCAVLMGANLANEVAEGNFCETTIGCTDKKYGKVLRDLFQANHFRVVVVD 194
            |:.|||.:|...|.|...||||||||||||:..||||||||..|.:|.:|::|.|..:|||.||:
Zfish   128 GLKLISDVIREKLGITMTVLMGANLANEVADEKFCETTIGCKSKPHGPLLKELMQTQNFRVTVVE 192

  Fly   195 DADAVEVCGALKNIVACGAGFVDGLKLGDNTKAAVIRLGLMEMIRFVDVFYPGSKLS--TFFESC 257
            :||.||:|||||||||.||||.|||..|||||||||||||||||.|..:|...|.:|  ||.|||
Zfish   193 EADVVEICGALKNIVAVGAGFCDGLSFGDNTKAAVIRLGLMEMIAFARLFCTASPVSPATFLESC 257

  Fly   258 GVADLITTCYGGRNRRVSEAFVTSGKTIEELEKEMLNGQKLQGPPTAEEVNYMLKNKGLEDKFPL 322
            |||||||||||||||:|.|||..:||:|||||||||||||||||.||.||:.:||:|.|.:||||
Zfish   258 GVADLITTCYGGRNRKVGEAFARTGKSIEELEKEMLNGQKLQGPATAAEVHQILKHKNLVEKFPL 322

  Fly   323 FTAIHKICTNQLKPNDLIDCIRNHPEHM 350
            |.|:::||.......:.|.|::||||||
Zfish   323 FNAVYQICFQNHPVKEFIMCLQNHPEHM 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh1NP_476565.1 glycerol3P_DH 6..343 CDD:274551 221/339 (65%)
gpd1bNP_956000.1 glycerol3P_DH 5..343 CDD:274551 221/339 (65%)

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