DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh1 and GPD1L

DIOPT Version :9

Sequence 1:NP_001260112.1 Gene:Gpdh1 / 33824 FlyBaseID:FBgn0001128 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_055956.1 Gene:GPD1L / 23171 HGNCID:28956 Length:351 Species:Homo sapiens


Alignment Length:350 Identity:214/350 - (61%)
Similarity:264/350 - (75%) Gaps:4/350 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ADKVNVCIVGSGNWGSAIAKIVGANAAALPEFEERVTMFVYEELIDGKKLTEIINETHENVKYLK 66
            |..:.||||||||||||:|||:|.|...|.:|...|.|:|:||.::|:|||:|||..|||||||.
Human     3 AAPLKVCIVGSGNWGSAVAKIIGNNVKKLQKFASTVKMWVFEETVNGRKLTDIINNDHENVKYLP 67

  Fly    67 GHKLPPNVVAVPDLVEAAKNADILIFVVPHQFIPNFCKQLLGKIKPNAIAISLIKGFDKAEG-GG 130
            |||||.||||:.:|.||.::||:|:||:|||||...|.::.|::...|:.|:||||.|  || .|
Human    68 GHKLPENVVAMSNLSEAVQDADLLVFVIPHQFIHRICDEITGRVPKKALGITLIKGID--EGPEG 130

  Fly   131 IDLISHIITRHLKIPCAVLMGANLANEVAEGNFCETTIGCTDKKYGKVLRDLFQANHFRVVVVDD 195
            :.|||.||...:.|..:||||||:|||||...|||||||....:.|.:.::|.|..:||:.||||
Human   131 LKLISDIIREKMGIDISVLMGANIANEVAAEKFCETTIGSKVMENGLLFKELLQTPNFRITVVDD 195

  Fly   196 ADAVEVCGALKNIVACGAGFVDGLKLGDNTKAAVIRLGLMEMIRFVDVFYPGS-KLSTFFESCGV 259
            ||.||:|||||||||.||||.|||:.|||||||||||||||||.|..:|..|. ..:||.|||||
Human   196 ADTVELCGALKNIVAVGAGFCDGLRCGDNTKAAVIRLGLMEMIAFARIFCKGQVSTATFLESCGV 260

  Fly   260 ADLITTCYGGRNRRVSEAFVTSGKTIEELEKEMLNGQKLQGPPTAEEVNYMLKNKGLEDKFPLFT 324
            |||||||||||||||:|||..:||||||||||||||||||||.|:.||..:||.|||.|||||||
Human   261 ADLITTCYGGRNRRVAEAFARTGKTIEELEKEMLNGQKLQGPQTSAEVYRILKQKGLLDKFPLFT 325

  Fly   325 AIHKICTNQLKPNDLIDCIRNHPEH 349
            |:::||.......:::.|:::||||
Human   326 AVYQICYESRPVQEMLSCLQSHPEH 350

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Gpdh1NP_001260112.1 glycerol3P_DH 6..343 CDD:274551 208/338 (62%)
GPD1LNP_055956.1 glycerol3P_DH 7..344 CDD:274551 208/338 (62%)