DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gpdh1 and Gpd1

DIOPT Version :10

Sequence 1:NP_476565.1 Gene:Gpdh1 / 33824 FlyBaseID:FBgn0001128 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_034401.1 Gene:Gpd1 / 14555 MGIID:95679 Length:349 Species:Mus musculus


Alignment Length:352 Identity:235/352 - (66%)
Similarity:275/352 - (78%) Gaps:5/352 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADKVNVCIVGSGNWGSAIAKIVGANAAALPEFEERVTMFVYEELIDGKKLTEIINETHENVKYL 65
            ||.| .||||||||||||||||||:||..|..|:.||||:|:||.|.|:|||||||..|||||||
Mouse     1 MAGK-KVCIVGSGNWGSAIAKIVGSNAGRLAHFDPRVTMWVFEEDIGGRKLTEIINTQHENVKYL 64

  Fly    66 KGHKLPPNVVAVPDLVEAAKNADILIFVVPHQFIPNFCKQLLGKIKPNAIAISLIKGFDKAEG-G 129
            .||||||||||:||:|:||..||||:||||||||...|.||.|.:|.|.|.||||||.|  || .
Mouse    65 PGHKLPPNVVAIPDVVQAATGADILVFVVPHQFIGKICDQLKGHLKANTIGISLIKGVD--EGPN 127

  Fly   130 GIDLISHIITRHLKIPCAVLMGANLANEVAEGNFCETTIGCTDKKYGKVLRDLFQANHFRVVVVD 194
            |:.|||.:|...|.||.:||||||:|:||||..||||||||.|...|::|:||.|..:||:.||.
Mouse   128 GLKLISEVIGERLGIPMSVLMGANIASEVAEEKFCETTIGCKDPAQGQLLKDLMQTPNFRITVVQ 192

  Fly   195 DADAVEVCGALKNIVACGAGFVDGLKLGDNTKAAVIRLGLMEMIRFVDVFYPGSKLS-TFFESCG 258
            :.|.||:|||||||||.||||.|||..|||||||||||||||||.|..:|..|:..| ||.||||
Mouse   193 EVDTVEICGALKNIVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGTVSSATFLESCG 257

  Fly   259 VADLITTCYGGRNRRVSEAFVTSGKTIEELEKEMLNGQKLQGPPTAEEVNYMLKNKGLEDKFPLF 323
            ||||||||||||||:|:|||..:||:||:||||||||||||||.||.|::.:|::|||.||||||
Mouse   258 VADLITTCYGGRNRKVAEAFARTGKSIEQLEKEMLNGQKLQGPQTARELHSILQHKGLVDKFPLF 322

  Fly   324 TAIHKICTNQLKPNDLIDCIRNHPEHM 350
            ||::|:|.......:.|.|::||||||
Mouse   323 TAVYKVCYEGQPVGEFIRCLQNHPEHM 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gpdh1NP_476565.1 glycerol3P_DH 6..343 CDD:274551 225/338 (67%)
Gpd1NP_034401.1 glycerol3P_DH 5..342 CDD:274551 225/338 (67%)

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