DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsf and NR4A3

DIOPT Version :9

Sequence 1:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_775292.1 Gene:NR4A3 / 8013 HGNCID:7982 Length:637 Species:Homo sapiens


Alignment Length:696 Identity:143/696 - (20%)
Similarity:228/696 - (32%) Gaps:242/696 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 MNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAHAAAAHHAAVAAAA 146
            |.:..::.|.| |.|..|   ||||||              |||||||...|    ...::..|:
Human    90 MQRPLIKVEEG-RAPSYH---HHHHHH--------------HHHHHHHQQQH----QQPSIPPAS 132

  Fly   147 ASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQQGPAPPAGHLHHGG 211
            :.    ....:|       |.|..:.|...:.|..||.||.      :||....|.|:.      
Human   133 SP----EDEVLP-------STSMYFKQSPPSTPTTPAFPPQ------AGALWDEALPSA------ 174

  Fly   212 AGHQHATAFHHPG---HGHALPAPHGGVVSNPGGNSSA--ISGSGPGSTLPFPS--HLLHHNLIA 269
                       ||   .|..|..|...|.:..|.....  ...|.|....|.|:  |.|.::..|
Human   175 -----------PGCIAPGPLLDPPMKAVPTVAGARFPLFHFKPSPPHPPAPSPAGGHHLGYDPTA 228

  Fly   270 EAASKLP-GITATAVAAVVSSTSTPYA-SAAQTSSPSSNNHNYSSPSPSNSIQSISSIGSRSGGG 332
            .||..|| |..|.|.:...:..|.||. ..|:.::|.:......:|||:.|              
Human   229 AAALSLPLGAAAAAGSQAAALESHPYGLPLAKRAAPLAFPPLGLTPSPTAS-------------- 279

  Fly   333 EEGLSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQH--------------RQM 383
                ||..|||.:      |||   |..|:.|......:...:.:.||              |.:
Human   280 ----SLLGESPSL------PSP---PSRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTV 331

  Fly   384 SRHSLSEATTPPSHASLMICASNNNNNNNNNNNN-------------GEHKQSSYTSG------- 428
            .::            :..:|.:|.|...:....|             |..|:...|..       
Human   332 QKN------------AKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGR 384

  Fly   429 ------SP---TPTTPTPPPP---------RSGVGST---------CNTASSSSGFLELLLSPDK 466
                  ||   .|:.|:||.|         |:...||         |.|..:::|          
Human   385 LPSKPKSPLQQEPSQPSPPSPPICMMNALVRALTDSTPRDLDYSRYCPTDQAAAG---------- 439

  Fly   467 CQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPFQTLSKNDQHLLLQ 531
                  ...:|     .||..:....|.::.:.           |.:.:..|..|.|.||.||::
Human   440 ------TDAEH-----VQQFYNLLTASIDVSRS-----------WAEKIPGFTDLPKEDQTLLIE 482

  Fly   532 ESWKELFLLNLAQWTIPLDLTPILESPLIRERVLQDEATQTE----------------MKTIQEI 580
            .::.|||:|.|:                ||....:|:.....                :.:|::.
Human   483 SAFLELFVLRLS----------------IRSNTAEDKFVFCNGLVLHRLQCLRGFGEWLDSIKDF 531

  Fly   581 LCRFRQITPDGSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVRLRYPRQATRFGRL 645
            ....:.:..|...:.|:.|:::.. |..||.:.:.||.|.::....|.||.......:.|. .::
Human   532 SLNLQSLNLDIQALACLSALSMIT-ERHGLKEPKRVEELCNKITSSLKDHQSKGQALEPTE-SKV 594

  Fly   646 LLLLPSLRTIRAATIEALFFKETIGNVPIARLLRDMYTMEPAQVDK 691
            |..|..||.|....::.:|:.:          |.|:.: .|:.:||
Human   595 LGALVELRKICTLGLQRIFYLK----------LEDLVS-PPSIIDK 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 5/15 (33%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748 40/219 (18%)
NR4A3NP_775292.1 NR_DBD_NGFI-B 301..375 CDD:143527 9/85 (11%)
NR_LBD 407..637 CDD:299703 51/284 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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