DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsf and NR2C2

DIOPT Version :9

Sequence 1:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_011532360.1 Gene:NR2C2 / 7182 HGNCID:7972 Length:648 Species:Homo sapiens


Alignment Length:705 Identity:161/705 - (22%)
Similarity:247/705 - (35%) Gaps:264/705 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACRLAKC 77
            |.||||::||:|||..||:||.||||||:.:|..|:|::..|    |.::|.|||:|:.|||.||
Human   169 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQD----CIINKHHRNRCQFCRLKKC 229

  Fly    78 FQSAMNKDAVQHERGP-----RKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAHAAAA 137
            .:..|..::||.||.|     .||                                         
Human   230 LEMGMKMESVQSERKPFDVQREKP----------------------------------------- 253

  Fly   138 HHAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHI----STHPPAPAAPPSGFHLTASGAQQ 198
                                     :|.:||   |:.|    ....|..|.|.  |.....||:|
Human   254 -------------------------SNCAAS---TEKIYIRKDLRSPLIATPT--FVADKDGARQ 288

  Fly   199 GPAPPAGHLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHLL 263
                               |....||....:..|   ::...|                  :.||
Human   289 -------------------TGLLDPGMLVNIQQP---LIREDG------------------TVLL 313

  Fly   264 HHNLIAEAASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGSR 328
            ..:..||.:....|..|..|.::.:            .|.|.||.:.|...|.:  ||.|.|...
Human   314 ATDSKAETSQGALGTLANVVTSLAN------------LSESLNNGDTSEIQPED--QSASEITRA 364

  Fly   329 SGGGEEGLSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHSLSEATT 393
            .....:.|:             |...|:||.|:.|       :.||.|.      |.|.:|...:
Human   365 FDTLAKALN-------------TTDSSSSPSLADG-------IDTSGGG------SIHVISRDQS 403

  Fly   394 PP-----------SHASLMICASNNNNNNNNNNNNGEHKQSSYTSGSPTPTTPTPPPPRSGVGST 447
            .|           :|.:..:                              |.|:|.|....|...
Human   404 TPIIEVEGPLLSDTHVTFKL------------------------------TMPSPMPEYLNVHYI 438

  Fly   448 CNTASSSSGFLELLLSPDKCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWV 512
            |.:||                                                  ||||:::.|.
Human   439 CESAS--------------------------------------------------RLLFLSMHWA 453

  Fly   513 KCLMPFQTLSKNDQHLLLQESWKELFLLNLAQWTIPLDLTPILESPL--IRERVLQDEATQTEMK 575
            :.:..||.|.::....|::..|.|||.|.|||....:.|:.||.:.:  ::..:.:|:.:...:|
Human   454 RSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILAAIVNHLQNSIQEDKLSGDRIK 518

  Fly   576 TIQEILCRFRQ-------ITPDGSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVRL 633
            .:.|.:.:.::       :..||.|...:|||.||:|:..||.....:|..|::||..|.|:|:.
Human   519 QVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGLTSTSQIEKFQEKAQMELQDYVQK 583

  Fly   634 RYPRQATRFGRLLLLLPSLRTIRAATIEALFFKETIGNVPIARLLRDMYTMEPAQ 688
            .|.....|..|:|:.||:||.:.:...|.|||...||||.|..::..:..||.|:
Human   584 TYSEDTYRLARILVRLPALRLMSSNITEELFFTGLIGNVSIDSIIPYILKMETAE 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 43/89 (48%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748 54/212 (25%)
NR2C2XP_011532360.1 NR_DBD_TR2_like 164..250 CDD:143525 41/84 (49%)
NR_LBD_TR2_like 413..634 CDD:132750 67/300 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7185
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.860

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