DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dsf and NR2F1

DIOPT Version :9

Sequence 1:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_005645.1 Gene:NR2F1 / 7025 HGNCID:7975 Length:423 Species:Homo sapiens


Alignment Length:696 Identity:153/696 - (21%)
Similarity:211/696 - (30%) Gaps:370/696 - (53%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GTAGDR----------LLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLK 56
            |||||:          ...|.|.||||:|||||||.::|:||..|||||:.||..|||:|..:  
Human    65 GTAGDKGQGPPGSGQSQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRN-- 127

  Fly    57 GRCPVDKTHRNQCRACRLAKCFQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAA 121
              ||:|:.|||||:.|||.||.:..|.::|||..|.|                            
Human   128 --CPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMP---------------------------- 162

  Fly   122 AHHHHHHHHHAHAAAAHHAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPP 186
                                                                             
Human   163 ----------------------------------------------------------------- 162

  Fly   187 SGFHLTASGAQQGPAPPAGHLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSG 251
                         |..|                                   |||          
Human   163 -------------PTQP-----------------------------------NPG---------- 169

  Fly   252 PGSTLPFPSHLLHHNLIAEAASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPS 316
                                                        ..|.|:....|.|.|.|    
Human   170 --------------------------------------------QYALTNGDPLNGHCYLS---- 186

  Fly   317 NSIQSISSIGSRSGGGEEGLSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHR 381
                                                                             
Human   187 ----------------------------------------------------------------- 186

  Fly   382 QMSRHSLSEATTPPSHASLMICASNNNNNNNNNNNNGEHKQSSYTSGSPTPTTPTPPPPRSGVGS 446
                          .:.||::.|.                                |.|.|..||
Human   187 --------------GYISLLLRAE--------------------------------PYPTSRYGS 205

  Fly   447 TCNTASSSSGFLELLLSPDKCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRW 511
            .|             :.|                        :.::..|.:.|..|||||.||.|
Human   206 QC-------------MQP------------------------NNIMGIENICELAARLLFSAVEW 233

  Fly   512 VKCLMPFQTLSKNDQHLLLQESWKELFLLNLAQWTIPLDLTPIL------ESPLIRERVLQDEAT 570
            .:.:..|..|...||..||:.:|.|||:||.||.::||.:.|:|      .||:..:||:   |.
Human   234 ARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVV---AF 295

  Fly   571 QTEMKTIQEILCRFRQITPDGSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVRLRY 635
            ...::..||.:.:.:.:..|.:|..|:|||.||..:..||.|...:|.||:::||.|.::||.:|
Human   296 MDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDAAHIESLQEKSQCALEEYVRSQY 360

  Fly   636 PRQATRFGRLLLLLPSLRTIRAATIEALFFKETIGNVPIARLLRDM 681
            |.|.:|||:|||.||||||:.::.||.|||...:|..||..|:|||
Human   361 PNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 48/102 (47%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748 74/209 (35%)
NR2F1NP_005645.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..81 5/15 (33%)
NR_DBD_COUP_TF 86..158 CDD:143516 42/75 (56%)
NR_LBD_COUP-TF 184..419 CDD:132746 93/378 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.