Protein Alignment dsf and nr1d4b

DIOPT Version :9

• Sequence 1: NP_001260109.1
• Gene: dsf / 33823
• FlyBaseID: FBgn0015381
• Length: 691
• Species: Drosophila melanogaster
• Sequence 2: NP_001272462.1
• Gene: nr1d4b / 571948
• ZFINID: ZDB-GENE-080403-6
• Length: 576
• Species: Danio rerio
• Alignment Length: 687
• Identity: 138/687 - (20%)
• Similarity: 221/687 - (32%)
• Gaps: 255/687 - (37%)

  Fly     3 TAGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRN 67
            |.|..||   ||||||.:||.|||:::|:||.|||:|||.:|..|......:   .|.:.:.:||
Zfish   112 TGGMVLL---CKVCGDIASGFHYGVHACEGCKGFFRRSIQQNIHYKMCVKNE---NCLIMRMNRN 170

  Fly    68 QCRACRLAKCFQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHA 132
            :|:.||..||....|::|||:..|.|::.|..
Zfish   171 RCQHCRFKKCLSVGMSRDAVRFGRIPKREKQR--------------------------------- 202

  Fly   133 HAAAAHHAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQ 197
                                        |:..:.:
Zfish   203 ----------------------------LLDEMQS------------------------------ 209

  Fly   198 QGPAPPAGHLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHL 262
                                                                             
Zfish   210 ----------------------------------------------------------------- 209

  Fly   263 LHHNLIAEAASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGS 327
             :.|.:.|:||...|.|        :.|.||                 |||....|.:||..|..
Zfish   210 -YMNSLNESASMDIGCT--------TPTETP-----------------SSPEDGQSEESIGVISQ 248

  Fly   328 RSGGGEEGLSLGSESPRVNVETETPSPSNSPPLS--------AGSIS--PAPTLTTSSGSPQHRQ 382
                ....:.:..|..:|.|:.|....:|:.|.|        :|.:.  |.|.::.
Zfish   249 ----AYRNIFVNGEKLQVKVDQENNVNNNNNPSSFRHHPMQESGYVQSHPQPNISA--------- 300

  Fly   383 MSRHSLSEATTPPSHASLMICASNNNNNNNNNNNNGEHK--QSSYTSGSPTPTTPTPPPPRSGVG 445
             ..||:...|:..:.:...: |:.||...:...:||.:.  |||..|...|||...|....|...
Zfish   301 -QEHSVHSTTSCLAQSRCPV-ANQNNKPTSQVLDNGHYNFPQSSSPSQGTTPTQSYPTKHNSYST 363

  Fly   446 STCNTASSSSGFLELLLSP-DKCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAV 509
            .|.:.....|...::|..| :.|.   .....|::    ||:       ||...:.....:...|
Zfish   364 QTQSCPWRLSPGAKVLACPLNACP---VSSASHSS----QQV-------WESFSQCFTPAVKEVV 414

  Fly   510 RWVKCLMPFQTLSKNDQHLLLQESWKELF------LLNLAQWTIPLDLTPILES---PLIRERVL 565
            .:.|.:..||.||::||.:||:....::.      |.|..:.|:     ..|..   ||...|||
Zfish   415 EFAKSIPGFQALSQHDQVMLLKAGTFQVLMVRFCSLFNAKERTV-----TFLNGQTYPLSYLRVL 474

  Fly   566 QDEATQTEMKTIQEILCRFRQ----ITPDGSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCI 626
                   .|..:.:.:..|.:    :..:..|:....|:.|.:.:.:|:.|:..||.||:.....
Zfish   475 -------GMGNLLDAMFEFSEKLGSMGLEADEMALFMAVVLVSADRSGISDMGAVEQLQEDLIGA 532

  Fly   627 LSDHVRLRYPRQATRFGRLLLLLPSLRTIRAATIEAL 663
            |...:..|.|..::.|.:|.|.||.|||:.....|.|
Zfish   533 LRALITRRKPEDSSLFPKLPLRLPDLRTLNNQHSEKL 569

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
dsf	NP_001260109.1	NR_DBD_TLX	5..98	CDD:143537	39/92 (42%)
		NR_LBD_Tlx_PNR_like	467..671	CDD:132748	49/210 (23%)
nr1d4b	NP_001272462.1	NR_DBD_REV_ERB	115..202	CDD:143540	39/92 (42%)
		NR_LBD	386..574	CDD:299703	49/210 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910